Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I11
(402 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12) 27 4.3
SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 27 4.3
SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) 27 5.7
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_53562| Best HMM Match : Exo_endo_phos (HMM E-Value=0.018) 27 7.6
SB_9710| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_48362| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=9.4e-08) 26 10.0
SB_36931| Best HMM Match : FabA (HMM E-Value=5.5) 26 10.0
SB_11737| Best HMM Match : Glyco_hydro_65m (HMM E-Value=0) 26 10.0
>SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1436
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = +1
Query: 109 AINYGIVKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSER 288
A+ + I ++ Y+YYA + YNN LTY+ N+ + + + L ++
Sbjct: 822 ALKWAITEKFRDYLYYAPSFTVYTYNNP---LTYILTTAKLNATGHRWVAEL-----ADY 873
Query: 289 YGNLKHRRGEIY 324
+K+R G IY
Sbjct: 874 NFTIKYRPGRIY 885
>SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12)
Length = 316
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 171 VGIVGVIHILLFLFYNSIINSLCIVKNTV 85
VG + + +ILLF +I ++C+V NTV
Sbjct: 168 VGFLALNNILLFKVVGCVIITICLVLNTV 196
>SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = -1
Query: 171 VGIVGVIHILLFLFYNSIINSLCIVKNTVLHFSAINLK*SVHINEELWINFI 16
+ I+ +I+I++ + IIN + I+ N +++ IN+ ++I + IN I
Sbjct: 24 INIIIIINIIINIIIIIIINIIIIIINIIINIIIINIIIIINIIINIIINII 75
>SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30)
Length = 173
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/56 (23%), Positives = 20/56 (35%)
Frame = +1
Query: 202 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFER 369
+ Y E + F S + FH W H+ E+Y+N L + R
Sbjct: 29 VVYSKESLKFRSVHVEFHGEARTNWDEMENYTTTHKNEEVYFNKKTSLLANVHLYR 84
>SB_28794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 238 YYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYF 363
YYYY++ + +++ Y H YY +Y YY+
Sbjct: 109 YYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYY 150
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 238 YYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYF 363
YYYY++ + +++ Y H YY +Y YY+
Sbjct: 110 YYYYYYYYYYYYYYYYYYYYYHHYYYYYYYYYYYYYYYYYYY 151
>SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/52 (25%), Positives = 19/52 (36%)
Frame = +1
Query: 214 TEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYYFER 369
TE + F S + FH W H+ E+Y+N L + R
Sbjct: 48 TESLKFRSVHVEFHGEARTNWDEIENYTTTHKNEEVYFNKKTSLLANVHLYR 99
>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
Length = 1123
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +1
Query: 127 VKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLK 303
++ +Q++ A + TF+Y+ E+ D + Y H L FW + N++
Sbjct: 644 IENLKQFIVQARFVETFVYDMTEKPGKCAIRDRERKTISYNDHRFLVFWTDFQNTNNMR 702
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 77 KCKTVFFTMQRLLIMEL*KRKSSMCITPTIPTLSF 181
+ K F ++ +EL RKSS+ IT P LSF
Sbjct: 89 RTKKDFLAKVNIVFVELKLRKSSLAITIIYPLLSF 123
>SB_53562| Best HMM Match : Exo_endo_phos (HMM E-Value=0.018)
Length = 721
Score = 26.6 bits (56), Expect = 7.6
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 241 YYYFHSHLPFWWSSER 288
+YYF + WW SER
Sbjct: 7 FYYFTKFIDIWWCSER 22
>SB_9710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1
Query: 139 EQYVYYANYSNTFLYNNEEQRLTYLTEDI 225
E Y YY + ++ ++NN+ R + +DI
Sbjct: 27 EPYTYYQSNASCIIFNNDSSRSSRYNDDI 55
>SB_48362| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=9.4e-08)
Length = 100
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 31 QFFVNMDTLLKIYRTKMQDGILHDAKAI--NYGIVKE 135
Q+ V ++ K+ TKM D +++DA + YG ++E
Sbjct: 23 QYVVKEASMSKLLSTKMADSVIYDALQLLGGYGYMEE 59
>SB_36931| Best HMM Match : FabA (HMM E-Value=5.5)
Length = 702
Score = 26.2 bits (55), Expect = 10.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 145 YVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWW 276
Y Y+ N + + + E R TYLTE+ N Y Y + + W
Sbjct: 65 YHYFMNSTESKYKHFVELRATYLTENRQLNMYDYRENDGIECAW 108
>SB_11737| Best HMM Match : Glyco_hydro_65m (HMM E-Value=0)
Length = 702
Score = 26.2 bits (55), Expect = 10.0
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = +1
Query: 1 RLPAPYEVYPQFFVNMDTLLKIYRTKMQDGILH 99
R+P+P ++ + + D+ +YR + +G+ H
Sbjct: 72 RIPSPCDISVRSNIPRDSTTNLYRLNVSEGVFH 104
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,006,590
Number of Sequences: 59808
Number of extensions: 232665
Number of successful extensions: 578
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -