Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I08
         (375 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    25   0.33 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.33 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.33 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.33 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.33 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.33 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.33 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    25   0.33 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.33 
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   3.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   3.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   5.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 72  LSTNGAPPRSTPPLSTPSNSNATKSS 97


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 15  LSTDGLKPRSLCPSSTDSVTSAAANT 92
           LST+G  PRS  P ST S ++A  ++
Sbjct: 116 LSTNGAPPRSTPPLSTPSNSNATKSS 141


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 356 SERPVSCWLQSLRVCHR 306
           SER +  W Q+ R+ H+
Sbjct: 128 SERQIKIWFQNRRMKHK 144


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 356 SERPVSCWLQSLRVCHR 306
           SER +  W Q+ R+ H+
Sbjct: 119 SERQIKIWFQNRRMKHK 135


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 193 IRVHATTEPGTYFWSEGR 246
           IRV++  EP   F++ GR
Sbjct: 146 IRVNSVQEPNNEFYAMGR 163


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 356 SERPVSCWLQSLRVCHRSYV 297
           SER V  W Q+ R   R  V
Sbjct: 196 SERQVKIWFQNRRAKERKQV 215


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -2

Query: 314 CHRSYVD*ILP 282
           CH+ Y+D ++P
Sbjct: 161 CHKPYIDVVVP 171


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 272 PGSNRRRQHLPS 237
           PG  R R+HLP+
Sbjct: 332 PGPARSRRHLPA 343


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 183 PRRAHRACTKPIKVVLLPSPSGVGVIP 103
           P R  R   KP  +   PSP G   +P
Sbjct: 261 PNRKPRTDFKPQVLPQWPSPIGASHLP 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,628
Number of Sequences: 336
Number of extensions: 2060
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)