Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I07
(590 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g32090.1 68414.m03949 early-responsive to dehydration protein... 31 0.43
At5g63720.1 68418.m07998 hypothetical protein 29 2.3
At3g56720.1 68416.m06309 expressed protein 29 2.3
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kina... 29 2.3
At2g21480.1 68415.m02556 protein kinase family protein contains ... 28 4.1
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 28 5.4
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 28 5.4
At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to... 27 7.1
At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase f... 27 9.4
At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase f... 27 9.4
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 27 9.4
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 27 9.4
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 27 9.4
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 27 9.4
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 27 9.4
>At1g32090.1 68414.m03949 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 806
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 118 EHDTPASGSTASLTTTIHHH-------PKQSHSEAW*FNSSDYQEHGTVRKNEKH 261
+H+T +S L T+ HHH P ++ A+ +SS Y+ H + E+H
Sbjct: 747 KHETQSSSPVTELGTSSHHHHVYNSTSPSSHYASAYEQSSSQYEYHYNTHQYEEH 801
>At5g63720.1 68418.m07998 hypothetical protein
Length = 492
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +1
Query: 169 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFERPSGTTCRLR 348
HHH + AW S + + E+ P S+G + HQ L
Sbjct: 378 HHHHDKEKPSAWNKLQSKFHHKHQEKSKERKRPMSESKGLTTHKQQHQGGHFHALVEGLV 437
Query: 349 RTRQHRDSQR 378
R R+H Q+
Sbjct: 438 RHRKHSKKQK 447
>At3g56720.1 68416.m06309 expressed protein
Length = 386
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 169 HHHPKQSHSEAW*FNSSDYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFER 321
H H + S + + + +Y HG ++ G R DRR+V+ ++ R
Sbjct: 90 HRHDRYSRDDNYGYKRDEYNRHGRDARSTSRDSRG-GRHSDRRRVETEYSR 139
>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 754
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 220 DYQEHGTVRKNEKHLPPGSSRGQDRRQVDHQFERPSGTTCR 342
D+ HG V K+ + G S GQD+ ++ ++ E G R
Sbjct: 256 DFTCHGPVSKSARFSGSGQSEGQDKNRIVYEREYMQGVLIR 296
>At2g21480.1 68415.m02556 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 871
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 335 LADCGEQGNTVTHKGHHPDLDSDTVAYLWTAPNDI 439
L DCG + +T T +G DS+TV Y+ A +DI
Sbjct: 58 LIDCGSKSSTKTPEGRVFKSDSETVQYI-EAKDDI 91
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 529 FSYFHRRRLNPDPEDDETLNDGGSKL 452
FS FHR+ NP E+D +GG L
Sbjct: 472 FSMFHRQYDNPGGENDALAENGGGSL 497
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 529 FSYFHRRRLNPDPEDDETLNDGGSKL 452
FS FHR+ NP E+D +GG L
Sbjct: 472 FSMFHRQYDNPGGENDALAENGGGSL 497
>At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to
trithorax-like protein 1 GI:12659210 from [Arabidopsis
thaliana]; characterized in Alvarez-Venegas R,et al,
ATX-1, an Arabidopsis Homolog of Trithorax, Activates
Flower Homeotic Genes.(Curr Biol. 2003 Apr
15;13(8):627-37 PMID: 12699618); contains Pfam profiles
PF00856: SET domain, PF00855: PWWP domain, PF00628,
PHD-finger; identical to cDNA trithorax-like protein 1
(TRX1) GI:12659209
Length = 1062
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 1 VKTAQHKDHYYNVPVYDSGCDSSDPRRC 84
+K+A HK Y P SGC ++P C
Sbjct: 798 IKSATHKTSEYLPPPNPSGCARTEPYNC 825
>At3g18850.2 68416.m02394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 540 WFQFYVCLGCLYIISYT 590
WF+ YV L C+Y+ S T
Sbjct: 337 WFRIYVSLACVYLTSAT 353
>At3g18850.1 68416.m02393 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
Acyltransferase
Length = 375
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 540 WFQFYVCLGCLYIISYT 590
WF+ YV L C+Y+ S T
Sbjct: 337 WFRIYVSLACVYLTSAT 353
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LQARQGDKIVGKWTINSNDPVGQLADCGEQGNTVTHKGHHPDL 394
L A + V W+++S D + +L++ G + ++V +PDL
Sbjct: 689 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 731
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LQARQGDKIVGKWTINSNDPVGQLADCGEQGNTVTHKGHHPDL 394
L A + V W+++S D + +L++ G + ++V +PDL
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LQARQGDKIVGKWTINSNDPVGQLADCGEQGNTVTHKGHHPDL 394
L A + V W+++S D + +L++ G + ++V +PDL
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LQARQGDKIVGKWTINSNDPVGQLADCGEQGNTVTHKGHHPDL 394
L A + V W+++S D + +L++ G + ++V +PDL
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 266 LQARQGDKIVGKWTINSNDPVGQLADCGEQGNTVTHKGHHPDL 394
L A + V W+++S D + +L++ G + ++V +PDL
Sbjct: 691 LVASVSEDAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,984,885
Number of Sequences: 28952
Number of extensions: 277811
Number of successful extensions: 895
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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