Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I05
(511 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09) 44 7e-05
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_34994| Best HMM Match : PI3K_rbd (HMM E-Value=2.4) 39 0.003
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 38 0.004
SB_36378| Best HMM Match : PI3K_rbd (HMM E-Value=2.4) 38 0.004
SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5) 38 0.004
SB_12539| Best HMM Match : VWA (HMM E-Value=0.00021) 38 0.006
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 37 0.011
SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09) 32 0.32
SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031) 31 0.42
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 30 1.3
SB_21739| Best HMM Match : VWA (HMM E-Value=6.4e-24) 29 2.2
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_24285| Best HMM Match : Glyco_transf_10 (HMM E-Value=6e-31) 29 2.9
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_3013| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2) 28 3.9
SB_48805| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-32) 28 5.1
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_38846| Best HMM Match : Cache (HMM E-Value=2.7e-09)
Length = 916
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +2
Query: 2 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEAD 169
K V+ V+D SGSM G ++ KEA T+L+ LNP D + + FES + +++ D
Sbjct: 160 KDVILVVDYSGSMGGSRLPIAKEAAKTVLDTLNPRDRVAFLAFESGVRRVKVTSGD 215
>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 11 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESII-TVHELSEADKEKT 181
+F++D SGSMSG+ + Q+KE + L L YF++I F S +V++ ++ E+T
Sbjct: 294 IFLVDRSGSMSGKHIFQVKEMLILFLKSLPANCYFNLIGFGSYYRSVYQETQIYDEET 351
>SB_34994| Best HMM Match : PI3K_rbd (HMM E-Value=2.4)
Length = 244
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 2 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESIITVHEL 157
K V+ V+D SGSM G ++ KEA T+L+ LNP D + + I V+ L
Sbjct: 160 KDVILVVDYSGSMGGSRLPIAKEAAKTVLDTLNPRDRVTTLSQLYIQDVYRL 211
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 11 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 136
+FV+D SGSMSG +++ + L L G YF+I+ F S
Sbjct: 219 IFVVDRSGSMSGSRIKDAARTLQLFLKSLPDGCYFNIVGFGS 260
>SB_36378| Best HMM Match : PI3K_rbd (HMM E-Value=2.4)
Length = 247
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 2 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGD 109
K V+ V+D SGSM G ++ KEA T+L+ LNP D
Sbjct: 211 KDVILVVDYSGSMGGSRLPIAKEAAKTVLDTLNPRD 246
>SB_17508| Best HMM Match : Herpes_gE (HMM E-Value=8.5)
Length = 394
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 11 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 136
+FV+D SGSMSG +++ + L L G YF+I+ F S
Sbjct: 293 IFVVDRSGSMSGSRIKDAARTLQLFLKSLPDGCYFNIVGFGS 334
>SB_12539| Best HMM Match : VWA (HMM E-Value=0.00021)
Length = 450
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 11 VFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 136
+FV+D SGSMSG +++ +E ++ L L +F+++ F S
Sbjct: 276 IFVIDRSGSMSGDRIKNARETLFLFLKSLPEHCHFNVVGFGS 317
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 2 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSII 124
K +V +LD S SM G+++ KE T+LN L D+ ++I
Sbjct: 94 KDIVIILDCSLSMKGKRLRMAKEIAKTVLNTLTKQDFVNVI 134
>SB_54257| Best HMM Match : Cache (HMM E-Value=4.4e-09)
Length = 820
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 8 VVFVLDTSGSMS-GRKMEQLKEAMYTILNELNPGDYFSIIDFESII 142
+V V+D S SMS +M ++A T+L+ L P D ++ F I
Sbjct: 218 IVVVIDRSSSMSTAGRMALARQAAVTVLDTLGPNDKVGVVAFSHFI 263
>SB_54638| Best HMM Match : Cache (HMM E-Value=0.0031)
Length = 598
Score = 31.5 bits (68), Expect = 0.42
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 2 KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESII 142
K V+ ++D SGSM G M K + +++ D+F++I ++
Sbjct: 10 KDVIIMVDASGSMRGVPMRIAKLSAMALIDTFEDNDFFNVISMAKLL 56
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 30.3 bits (65), Expect = 0.96
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Frame = +3
Query: 153 NCPK---PIRKKQGIN--TFITTKFNQSWI*LHRIKPHRRILRRLKLSSVD 290
NCP PI K G N T + K N WI L K H R L+ L V+
Sbjct: 476 NCPSCHYPIEKHLGCNFMTCVMCKTNFCWICLIDFKDHDRCLKEQSLKEVE 526
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 8 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFES 136
V+FVLD S SM G+ +++ K+ L+ + F+I+ F S
Sbjct: 687 VIFVLDASCSMKGKALQEAKKLTLMCLSLMEEEWAFNIVVFGS 729
>SB_21739| Best HMM Match : VWA (HMM E-Value=6.4e-24)
Length = 220
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 8 VVFVLDTSGSMSGRKMEQLKEAMYTILN--ELNP-GDYFSIIDFESIITVHELSEADKE 175
+VF++D SGS+ ++LKE + T++ ++P G S++ + S H LS D +
Sbjct: 3 LVFLVDGSGSIGSSNFDRLKEFVSTVIGGFVISPQGTQISVVVYHSSAKTH-LSFGDAQ 60
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +2
Query: 86 LNELNPGDYFSIIDFESIITVHELSEADKEKTRYK----YFYYNEIQPKL-DLVAPYQAT 250
L+ L YFS ID S E+ AD+ KT + F YN + L + A +Q
Sbjct: 1069 LDALGGARYFSTIDLASAYNQVEVHPADRHKTAFTSPMGLFEYNRMPFCLCNAPATFQRL 1128
Query: 251 PENIEKAKIIISRLESI 301
NI ++ I+ + L S+
Sbjct: 1129 MTNIFRSDILKTLLVSL 1145
>SB_24285| Best HMM Match : Glyco_transf_10 (HMM E-Value=6e-31)
Length = 414
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Frame = +2
Query: 101 PGDYFSIIDFESIITVHE-LSEADKEKTRY-KYFYYNE--IQPKLDLVAPYQ-ATPENIE 265
PG Y + +DF S+ + E + DK T Y +YF + + I K L P Q T N+
Sbjct: 325 PGSYINALDFPSVKALAEYIKYLDKNDTAYNEYFQWRKYYIAKKDALTFPCQLCTALNLN 384
Query: 266 KAKIIISRLESIGGTDINTALTVA 337
+ + E G N + A
Sbjct: 385 LKPKVYNNFEKYWGVQENCGVNDA 408
>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 215 PKLDLVAPYQATPENIEKAKIIISRLESIGGTDINTALTVAVDLINKYAGGNAR 376
P DL+ ++A EN + + S + + D+N+ V D+I+ +AG N +
Sbjct: 19 PSRDLLMGWKADGENFSEGFKVFSVIHKLVD-DVNSVKIVTGDVIHDFAGENVK 71
>SB_3013| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2)
Length = 213
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 280 DNFSLLNILRCGLIRCN*IQLWLNFVVIKVFIP 182
+ F LLN L +I+CN +W +VI +F P
Sbjct: 72 NEFQLLNRLLASMIQCN--GIWCCLIVIIIFFP 102
>SB_48805| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-32)
Length = 427
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 84 IVYIASFNCSILRPDMDPDVSRTKTT 7
+ YI+S + S L PD P S TK+T
Sbjct: 272 VPYISSVSTSSLSPDFSPQASPTKST 297
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 8 VVFVLDTSGSMSGRKMEQLKEAMYTILNELNPG 106
+ FV+D+SGS+ + + + + ++ NPG
Sbjct: 2206 LAFVVDSSGSIGRKNFNSMMQFIVDVIRNFNPG 2238
>SB_25685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 251 VWLDTVQLNPTLVEFRCNKSIYTLFFPYRLR 159
VW+ T QL FR N + +F+P RLR
Sbjct: 821 VWVITQQLTSITKPFRENIAALVVFYPARLR 851
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,996,358
Number of Sequences: 59808
Number of extensions: 313895
Number of successful extensions: 750
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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