Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I05
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    45   1e-06
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    26   0.64 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   2.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   4.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.9  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 45.2 bits (102), Expect = 1e-06
 Identities = 34/119 (28%), Positives = 59/119 (49%)
 Frame = +2

Query: 2   KYVVFVLDTSGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEKT 181
           K V+ +LD+SGSMSG++ +        IL+ L   D+F++I F           +D+ + 
Sbjct: 268 KDVIILLDSSGSMSGKEYQLAVATASAILDTLGDDDFFNLISF-----------SDQSRV 316

Query: 182 RYKYFYYNEIQPKLDLVAPYQATPENIEKAKIIISRLESIGGTDINTALTVAVDLINKY 358
               F     Q K+      +ATP+N+++ K  I+ +E     + + AL  A +L+ KY
Sbjct: 317 IVPCF-----QDKM-----VRATPDNVKEVKTAINAVECENTANFSAALETAFELLRKY 365


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -2

Query: 108 SPGFSSFNIVY--IASFNCSILRPDMDPDVSRTKTTY 4
           SP F + N++     +F  + LR D+ PD +R  T Y
Sbjct: 85  SPPFPNTNVILKPYPNFALNELRADLQPDANRIVTVY 121


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 179 TRYKYFYYNEIQPKLDLV 232
           T Y Y+Y+ +I PK+ LV
Sbjct: 148 TGYLYYYHYQIFPKISLV 165


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 224 PTLVEFRCNKSIYT 183
           P +  F C+KSIYT
Sbjct: 536 PVIENFNCDKSIYT 549


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +2

Query: 29   SGSMSGRKMEQLKEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEKTRYKYFYYNE 208
            SG+      + +KE     L+ +NP   F     E I  + E  E  +   ++K FY N 
Sbjct: 3224 SGNWLDNIFKDIKEDFNVFLSTVNPSRTFYYQLRERIAALSEELEESRHILQHK-FYSNN 3282

Query: 209  IQ 214
             Q
Sbjct: 3283 SQ 3284


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,605
Number of Sequences: 2352
Number of extensions: 10533
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)