Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I05
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.45 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.45 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 65  KEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEK 178
           K+    I N  N G YF + DF  I    + S  ++E+
Sbjct: 370 KDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERER 407


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 65  KEAMYTILNELNPGDYFSIIDFESIITVHELSEADKEK 178
           K+    I N  N G YF + DF  I    + S  ++E+
Sbjct: 370 KDTEILIGNNENEGTYFILYDFNDIFEKDQASFLERER 407


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 254 PVWLDTVQLNPT 219
           P W D V LNPT
Sbjct: 338 PAWCDRVLLNPT 349


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 346 EIHRYGQGRVDVGTTNGFEST 284
           E +RY  GRV + T  G E T
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKT 387


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 346 EIHRYGQGRVDVGTTNGFEST 284
           E +RY  GRV + T  G E T
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKT 387


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 195 KYLYLVFSLSASDSSWTVIID 133
           KYLY++         WTV+ D
Sbjct: 439 KYLYMLMEACLGGELWTVLRD 459


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 35  SMSGRKMEQLKEAMYTILNELNPGDYFSII 124
           +M+ +++ +L+  M    NEL P D   +I
Sbjct: 460 TMNRKQISELESNMQISPNELKPNDKSQVI 489


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 296 SIGGTDINTALTVAVDL 346
           S+GG  + T LTV   L
Sbjct: 292 SVGGESVETVLTVTAPL 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,127
Number of Sequences: 438
Number of extensions: 3292
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)