Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_I04
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 29 1.4
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 1.4
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 1.4
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 29 1.4
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 27 4.1
AF016451-10|AAB66006.2| 259|Caenorhabditis elegans Hypothetical... 27 5.5
AF016451-9|AAB66005.2| 524|Caenorhabditis elegans Udp-glucurono... 27 5.5
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 27 7.2
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical ... 27 7.2
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 7.2
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 7.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 9.5
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 26 9.5
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 176 IDERRSSAYGFIISARTV*WLREERIRVRNNNSVCGSHGQYGEEEKHE 33
+ E S +G++ + R +ER +R++ S GQ GEEE+ E
Sbjct: 178 VSETADSCFGWLSTMRPTREKDDERASIRSSLRNLSSGGQGGEEEEEE 225
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 176 IDERRSSAYGFIISARTV*WLREERIRVRNNNSVCGSHGQYGEEEKHE 33
+ E S +G++ + R +ER +R++ S GQ GEEE+ E
Sbjct: 2350 VSETADSCFGWLSTMRPTREKDDERASIRSSLRNLSSGGQGGEEEEEE 2397
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.1 bits (62), Expect = 1.4
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 176 IDERRSSAYGFIISARTV*WLREERIRVRNNNSVCGSHGQYGEEEKHE 33
+ E S +G++ + R +ER +R++ S GQ GEEE+ E
Sbjct: 2378 VSETADSCFGWLSTMRPTREKDDERASIRSSLRNLSSGGQGGEEEEEE 2425
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 113 REERIRVRNNNSVCGSHGQYGEEEKHESFHCRIVSE 6
+EE IR+ ++NS+ G+ GE+ SF R SE
Sbjct: 1235 KEETIRISDSNSIGTKIGRLGEKSADGSFFYRFSSE 1270
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 90 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 200
A P P F+ P+ P PI GPAF P P
Sbjct: 112 AAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 1 DNSDTIRQ*KLSCFSSSPYWPWLPQTELLLRTRILSSLNHQTVLAEIMN 147
DN D IR + CF+ W QT+ LR R L + + ++V + N
Sbjct: 2014 DNFDAIRVDENLCFAEKNLAVWPGQTDFWLRFRRLLTSSQKSVHDPVYN 2062
>AF016451-10|AAB66006.2| 259|Caenorhabditis elegans Hypothetical
protein C03A7.12 protein.
Length = 259
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 64 WLPQTELLLRTRILSSLNH 120
WLPQT+LL R++ ++H
Sbjct: 130 WLPQTDLLYDPRVIGFISH 148
>AF016451-9|AAB66005.2| 524|Caenorhabditis elegans
Udp-glucuronosyltransferase protein51 protein.
Length = 524
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 64 WLPQTELLLRTRILSSLNH 120
WLPQT+LL R++ ++H
Sbjct: 351 WLPQTDLLYDPRVIGFISH 369
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 90 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 200
A P P F+ P+ P P+ GPAF P P
Sbjct: 125 AAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 93 NPDPFFSQP--SNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPL 221
+P PF + P SN S P F + PP R +PL
Sbjct: 90 SPPPFMTSPATSNNSVSVARKTSAPPGFAQYEPDTAPPSRSTSPL 134
>AF003389-1|AAC71138.2| 865|Caenorhabditis elegans Hypothetical
protein F23H11.2 protein.
Length = 865
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -2
Query: 218 RVVVSLGWIIGMIEIDERRSSAYGFIISARTV*WLREERIRV 93
+++++L ++ ++ SS Y I+++ V W+RE+R R+
Sbjct: 288 QLILNLEMLVAILH-SALMSSGYQTILTSDVVRWIREDRFRI 328
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 96 PDPFFSQPSNGPSGNYEPIS 155
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 96 PDPFFSQPSNGPSGNYEPIS 155
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 99 DPFFSQPSNGPSGNYEPISTGPA 167
DP +QPS GP G + P P+
Sbjct: 306 DPSGAQPSGGPPGPFNPSGAPPS 328
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 93 NPDPFFSQPS-NGPSGNYEPISTGPAFVDFNHPNYPPK 203
NP P PS NGPS +P GP+ N P+ P K
Sbjct: 939 NPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNK 976
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,355,567
Number of Sequences: 27780
Number of extensions: 154187
Number of successful extensions: 484
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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