Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I03
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   0.93 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   0.93 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   0.93 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 537 FRTLRFYSS*IPIHIVFRVNRDIISLI-QAHTV 442
           F  + FYS+  PI+++ ++  D+I LI   HT+
Sbjct: 44  FFKIPFYSTLRPINLLVQIILDVILLILNVHTI 76


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 537 FRTLRFYSS*IPIHIVFRVNRDIISLI-QAHTV 442
           F  + FYS+  PI+++ ++  D+I LI   HT+
Sbjct: 44  FFKIPFYSTLRPINLLVQIILDVILLILNVHTI 76


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -1

Query: 537 FRTLRFYSS*IPIHIVFRVNRDIISLI-QAHTV 442
           F  + FYS+  PI+++ ++  D+I LI   HT+
Sbjct: 364 FFKIPFYSTLRPINLLVQIILDVILLILNVHTI 396


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 355 VSHTGQSCFYGDTEWIKIGYEKFGQ 429
           +SH GQ   +    W+ + Y + GQ
Sbjct: 384 LSHGGQLARFKCLSWLDLSYNRLGQ 408



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 388 DTEWIKIGYEKFGQFLSAYSVCLDKRNNI 474
           +T  IKI ++ F   L   +V +D R+NI
Sbjct: 648 NTSIIKIPFDVFRNMLPVRNVSVDVRDNI 676


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 10   NKRGKYYCEVSNEFG 54
            N  G+Y C V N++G
Sbjct: 1369 NNAGEYSCHVENDYG 1383


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = +1

Query: 337  EEIEPKVSHTGQSCFYGDTEWIKIGYEKF 423
            EE++P+  +    C++ +  W + G  K+
Sbjct: 1389 EELKPQSGYFKIVCYFTNWAWYRKGLGKY 1417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,298
Number of Sequences: 336
Number of extensions: 3720
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)