Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I03
         (642 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)                   35   0.065
SB_47305| Best HMM Match : I-set (HMM E-Value=0)                       29   2.4  
SB_19232| Best HMM Match : UCR_TM (HMM E-Value=5.1)                    29   2.4  
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_39426| Best HMM Match : C4 (HMM E-Value=0)                          28   7.4  
SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_29852| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_10222| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_28098| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.4  
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)                      27   9.8  
SB_50263| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_44830| Best HMM Match : I-set (HMM E-Value=1.1e-08)                 27   9.8  

>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
          Length = 653

 Score = 34.7 bits (76), Expect = 0.065
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 198 ERGILSINLSNGVHELPEEQYLSVLRSGNKFHSERRLL*IFRFQMY 335
           E GI S+N+S+ VH++  EQ L +   G+ F S  RL   +  Q+Y
Sbjct: 271 EEGIYSLNISDHVHDMEMEQCLCLSPLGSGFDSRLRLNNPYNSQLY 316


>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
          Length = 5832

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 1   AEFNKRGKYYCEVSNEFGTINRSF 72
           A  N  G+Y+CE SN  G+  R+F
Sbjct: 442 ASTNDEGQYFCEASNPLGSPKRTF 465



 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  NKRGKYYCEVSNEFGTINRSF 72
           N  GKY CE  N+ GT  R F
Sbjct: 154 NDSGKYKCEAKNKIGTSARDF 174



 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSF 72
           GKY CE +N+ GT  RSF
Sbjct: 699 GKYKCEATNKAGTAFRSF 716



 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 1    AEFNKRGKYYCEVSNEFGTINRSFYMQL 84
            A+    G+Y CE +N  GT +R F + +
Sbjct: 5505 AKHEHSGRYRCEATNSNGTAHRDFVLNI 5532


>SB_19232| Best HMM Match : UCR_TM (HMM E-Value=5.1)
          Length = 130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQLSDCIVDIKNDLKGNQP 132
           G+Y CEVSN  G+ +R+  + +   I   ++D++  QP
Sbjct: 11  GRYTCEVSNRLGSASRTGRLNVQGLIPVEEDDIEFLQP 48


>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6119

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQLSDCIVDIKNDLKGNQPIMIGSRFKWPQFETADG 183
           G Y CE SN  G  +RSF     D  V +K   KG  PI++    K    ET +G
Sbjct: 854 GVYKCEASNRLGKASRSF-----DVKVQVKGP-KGEAPIILS---KLRPVETEEG 899


>SB_14894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1052

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQL 84
           GKY C VSN +G+IN ++ +++
Sbjct: 411 GKYTCIVSNAYGSINHTYTLRV 432


>SB_39426| Best HMM Match : C4 (HMM E-Value=0)
          Length = 188

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 410 PILIHSVSP*KQDCPVCETLGSISSVHLKSEYL*ESP 300
           PI   +V P    C VCE+ G + +VH +S  L   P
Sbjct: 14  PIQASAVEPYISRCTVCESHGPVMAVHSQSTTLPTCP 50


>SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 472

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 216 INLSNGVHELPEEQYLSVLRSGNKFH-SERRLL*IFR 323
           + + + V ELP E Y  +  SGN F   ER+LL + R
Sbjct: 344 VEMKDKVKELPGELYFELSESGNNFGVGERQLLCLAR 380


>SB_29852| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 836

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQLSDCI 96
           G+Y CEVSN  G+ +R+  + + D I
Sbjct: 408 GRYTCEVSNRLGSASRTGRLNVQDKI 433


>SB_10222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 161

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQ 81
           G Y C  SN FG + RS +++
Sbjct: 88  GNYSCTASNNFGVVRRSIFIE 108


>SB_28098| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 49

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 19 GKYYCEVSNEFGTINRSFYMQ 81
          G Y C  SN FG + RS +++
Sbjct: 10 GNYSCTASNNFGVVRRSIFIE 30


>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
          Length = 947

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 1   AEFNKRGKYYCEVSNEFGTINRS 69
           A     GKY C+  N FG IN S
Sbjct: 482 ARVKDSGKYLCQAHNSFGMINAS 504


>SB_50263| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 391

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 171 NGRRLHSHTERGILSINLSNGVHELPEEQYLSVLR 275
           +G R+H   +R  +SI+L  GVH    + Y SV R
Sbjct: 120 SGMRIHPLYKRRNISIHLLRGVHNFVYKAYPSVWR 154


>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1705

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 410  PILIHSVSP*KQDCPVCETLGSISSVHLKSE 318
            PI   +V P    C VCE+ G + +VH K +
Sbjct: 1548 PIQASAVEPYISRCTVCESHGPVMAVHSKHD 1578


>SB_44830| Best HMM Match : I-set (HMM E-Value=1.1e-08)
          Length = 480

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 19  GKYYCEVSNEFGTINRSFYMQL 84
           G Y C VSN +G IN ++ +Q+
Sbjct: 281 GDYTCVVSNPYGQINHTYTLQV 302


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,385,437
Number of Sequences: 59808
Number of extensions: 439949
Number of successful extensions: 1077
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)