Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I03
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.5  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   7.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   AEFNKRGKYYCEVSNEFG 54
           AE +  G Y+C+ SN +G
Sbjct: 877 AEASDSGAYFCQASNLYG 894


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 1   AEFNKRGKYYCEVSNEFG 54
           AE +  G Y+C+ SN +G
Sbjct: 873 AEASDSGAYFCQASNLYG 890


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 430 FLSAYSVCLDKRNNIPIYAKHNMDRYLAGIEPESSKW 540
           FLS+      K   IP+Y K  +D  + G   +   W
Sbjct: 623 FLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMW 659


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 430 FLSAYSVCLDKRNNIPIYAKHNMDRYLAGIEPESSKW 540
           FLS+      K   IP+Y K  +D  + G   +   W
Sbjct: 623 FLSSMDESNTKSYEIPLYGKMTLDDKVFGFPLDRPMW 659


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 586 CVSQKNAISEDLSEWFHY 639
           CV +   I +D S+WF Y
Sbjct: 485 CVLKNTEIFKDKSDWFDY 502


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +2

Query: 356 FHIRGNPASTVTPNGLKSAMKNSV 427
           F +    +S   PN +K+  KN++
Sbjct: 67  FGVAPGTSSATNPNAMKTIFKNTI 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,349
Number of Sequences: 438
Number of extensions: 4473
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)