Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I02
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.96 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +2

Query: 272 SVCNGPETFSVCCGPPP--EINPEDMTLNE 355
           +VC     +S+ CG PP  ++NP++  + E
Sbjct: 349 AVCVNERPWSLYCGEPPCGQLNPDNPNVYE 378


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 188 CVGLYNCEHITYMMLDKTRKSKM 256
           C  LYNC H T +++  +R  ++
Sbjct: 142 CQFLYNCFHSTLLLMILSRYQRL 164


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 200 YNCEHITYMMLDKTRKSKMDYVRQSVC 280
           Y C      ++DK ++++  Y R   C
Sbjct: 120 YACREEKNCIIDKRQRNRCQYCRYQKC 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,758
Number of Sequences: 336
Number of extensions: 3532
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)