Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_I02
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   3e-05
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              28   0.090
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   1.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   2.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.9  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   5.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 17/42 (40%), Positives = 30/42 (71%)
 Frame = +2

Query: 455 NTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV 580
           NT I ++P +  I+  +++   ++CG ++IS +YVLTAAHC+
Sbjct: 166 NTGINEFPMMAGIK-RTYEP-GMICGATIISKRYVLTAAHCI 205


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +2

Query: 356 RCSRAVTAFPLESNNECCGVEDTVVNKIVRCEMNTKITQY 475
           RC  A+   P     E CG+ +T  N I++C+++ +   Y
Sbjct: 31  RCPEALFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKDLY 69


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 146 ISNACKTPDDKP 181
           ++NACK  DDKP
Sbjct: 392 LTNACKKKDDKP 403


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 568 SSEHVLRTDE*ATA*QLHMIKTLIFDHHKPWILGDFCVHFAPXNFINN 425
           +S H+L   +  T+  L+ +    +DH K  ++G F +  +  +  NN
Sbjct: 24  NSVHILSKYQLITSTTLNWLPRTHYDHLKEIVIGGFEIEKSEDDSFNN 71


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 182 PVYRLESYKRLKW 144
           P YRLE  KRL W
Sbjct: 333 PKYRLELQKRLPW 345


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 234 IRPERVKWITFDNPF 278
           I PER ++I F  PF
Sbjct: 525 INPERAEFIEFSKPF 539


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 559 AHCCTLCHWSNLD 597
           AHC  LCH  + D
Sbjct: 741 AHCFALCHCCDFD 753


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 128 VYYSHNHIVSLLKVSYPQLFCFY 60
           ++Y+ N IV  + +SY  +  FY
Sbjct: 236 LFYTVNLIVPCVSISYLSVLAFY 258


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 125 YYSHNHIVSLLKVSYPQLFCF 63
           YYS+  +++L+  S P   C+
Sbjct: 640 YYSYIGVLTLVATSMPTYICY 660


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 209 EHITYMMLDKTRKSKMDYVRQSVCNGPETFSVCCGPPPEINP 334
           +H+ Y       +S   YV     +G + F+  C P P   P
Sbjct: 362 QHLHYRQPPTLSESYSSYVNSMYASGAQ-FATPCTPSPPRGP 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,823
Number of Sequences: 438
Number of extensions: 4245
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)