Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H22
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   0.81 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 550 LVLNKIYLKGLFNF*LTYSFHSYV-DICQLLNEIEQ 446
           LVL  +Y   LF   +T+ +H+Y+ D+   +NE  Q
Sbjct: 138 LVLAFLYSFDLFANGITFGWHTYIFDVPNFVNEYVQ 173


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 114 PCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNIN 233
           P  ++ PKL++  +   D  + L  + D+C D++     N
Sbjct: 280 PFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKETN 319


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 114 PCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNIN 233
           P  ++ PKL++  +   D  + L  + D+C D++     N
Sbjct: 172 PFTIVEPKLNKHEDLPQDLSMKLSKNNDQCLDLSKTKETN 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,732
Number of Sequences: 336
Number of extensions: 2331
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)