Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H22
(580 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 91 4e-19
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 90 9e-19
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 84 7e-17
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 80 9e-16
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 80 9e-16
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 80 1e-15
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 79 3e-15
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 79 3e-15
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 77 6e-15
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 76 1e-14
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 75 3e-14
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 71 6e-13
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 71 7e-13
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 68 4e-12
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 66 2e-11
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 66 2e-11
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 65 3e-11
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 65 3e-11
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 62 3e-10
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 61 6e-10
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 60 8e-10
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 60 1e-09
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 59 2e-09
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 59 2e-09
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 59 2e-09
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 58 4e-09
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 58 6e-09
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 58 6e-09
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 55 4e-08
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 54 5e-08
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 54 5e-08
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 54 7e-08
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 53 2e-07
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 53 2e-07
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 52 2e-07
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 52 2e-07
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 51 5e-07
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 50 8e-07
At1g76080.1 68414.m08835 thioredoxin family protein low similari... 50 8e-07
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 50 1e-06
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 49 2e-06
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 49 3e-06
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 48 3e-06
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 48 5e-06
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 47 1e-05
At1g07700.3 68414.m00829 thioredoxin family protein low similari... 45 4e-05
At1g07700.1 68414.m00828 thioredoxin family protein low similari... 45 4e-05
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 44 6e-05
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 43 1e-04
At5g04260.1 68418.m00417 thioredoxin family protein low similari... 41 5e-04
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 41 7e-04
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 40 0.001
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 39 0.003
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 37 0.011
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 36 0.015
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 36 0.015
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 36 0.015
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 36 0.015
At1g07700.2 68414.m00827 thioredoxin family protein low similari... 35 0.034
At3g03860.1 68416.m00398 expressed protein 35 0.045
At5g08290.1 68418.m00976 yellow-leaf-specific protein 8 (YLS8) /... 31 0.42
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 31 0.56
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 30 1.3
At4g31240.2 68417.m04435 expressed protein 28 3.9
At4g31240.1 68417.m04434 expressed protein 28 3.9
At1g64290.1 68414.m07285 F-box protein-related contains TIGRFAM ... 28 5.2
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 27 6.8
At3g07330.1 68416.m00874 glycosyl transferase family 2 protein s... 27 6.8
At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-l... 27 9.0
At4g31040.1 68417.m04408 proton extrusion protein-related contai... 27 9.0
At4g03415.1 68417.m00468 protein phosphatase 2C family protein /... 27 9.0
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 27 9.0
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 91.5 bits (217), Expect = 4e-19
Identities = 38/91 (41%), Positives = 60/91 (65%)
Frame = +3
Query: 24 HIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDEC 203
H D ++ ++ +KL+VIDF A+WC PC+MI P +++A + S + KVDVDE
Sbjct: 12 HTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDEL 71
Query: 204 EDIAAEYNINAMPTFVFVKATKKLEEFSGAN 296
+ +A E+ + AMPTFVF+KA + +++ GAN
Sbjct: 72 QSVAKEFGVEAMPTFVFIKAGEVVDKLVGAN 102
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 90.2 bits (214), Expect = 9e-19
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 251
+KL+V+DF A+WCGPC+MI P + MA++ +D + +K+DVDE D+A E+N+ AMPTFV
Sbjct: 47 NKLLVVDFSASWCGPCRMIEPAIHAMADKFND-VDFVKLDVDELPDVAKEFNVTAMPTFV 105
Query: 252 FVKATKKLEEFSGANVD 302
VK K++E GA D
Sbjct: 106 LVKRGKEIERIIGAKKD 122
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 83.8 bits (198), Expect = 7e-17
Identities = 35/94 (37%), Positives = 63/94 (67%)
Frame = +3
Query: 15 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 194
+SIH + KT+ ++ +L+++ F ATWCGPC+ + P +A + S +V LKVD+
Sbjct: 273 ISIHSTSELEAKTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHS-RVVFLKVDI 331
Query: 195 DECEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 296
D+ D+AA +NI+++PTF F++ K++++ GA+
Sbjct: 332 DKANDVAASWNISSVPTFCFIRDGKEVDKVVGAD 365
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 80.2 bits (189), Expect = 9e-16
Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 194
+ IK+ + K+RL+ D KL+VI+F A WCGPCK + PKL+E+A + +D + +K+DV
Sbjct: 40 VEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTD-VEFVKIDV 98
Query: 195 DECEDIAAEYNINAMPTFVFVKATKKLEEFSGANVD 302
D + E+N++ +P VF+K ++++ G VD
Sbjct: 99 DVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVD 134
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 80.2 bits (189), Expect = 9e-16
Identities = 37/96 (38%), Positives = 58/96 (60%)
Frame = +3
Query: 15 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 194
++ H + + K + + KL+VIDF A+WC PC+ I P EMA + ++ +V K+DV
Sbjct: 8 IACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTN-VVFFKIDV 66
Query: 195 DECEDIAAEYNINAMPTFVFVKATKKLEEFSGANVD 302
DE + +A E+ + AMPTFVF+K ++ GA D
Sbjct: 67 DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKD 102
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/86 (41%), Positives = 55/86 (63%)
Frame = +3
Query: 36 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIA 215
FDDL + DK V++DF ATWCGPC+++ P L+E++ + D I V+K+D ++ +A
Sbjct: 68 FDDLL----QNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLA 123
Query: 216 AEYNINAMPTFVFVKATKKLEEFSGA 293
+Y I A+PTF+ K K + F GA
Sbjct: 124 NKYQIEALPTFILFKDGKLWDRFEGA 149
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 78.6 bits (185), Expect = 3e-15
Identities = 37/89 (41%), Positives = 55/89 (61%)
Frame = +3
Query: 27 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 206
++D+ + K + + KL+VIDF ATWC PC+ I P ++A + D +V KVDVDE
Sbjct: 13 VEDWTE-KLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLD-VVFFKVDVDELN 70
Query: 207 DIAAEYNINAMPTFVFVKATKKLEEFSGA 293
+A E+ + AMPTF+F+K + E GA
Sbjct: 71 TVAEEFKVQAMPTFIFMKEGEIKETVVGA 99
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +3
Query: 78 LVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFV 257
LVV+DF A+WCGPC+ I P ++A ++ + ++ LKVD DE + +A+++ I AMPTF+F+
Sbjct: 30 LVVVDFTASWCGPCRFIAPFFADLAKKLPN-VLFLKVDTDELKSVASDWAIQAMPTFMFL 88
Query: 258 KATKKLEEFSGANVD 302
K K L++ GA D
Sbjct: 89 KEGKILDKVVGAKKD 103
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 77.4 bits (182), Expect = 6e-15
Identities = 34/86 (39%), Positives = 54/86 (62%)
Frame = +3
Query: 36 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIA 215
FD + L + DK V++D+ ATWCGPC+ + P L+E++ + D I V+K+D ++ IA
Sbjct: 70 FDSFEDLLVNS-DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIA 128
Query: 216 AEYNINAMPTFVFVKATKKLEEFSGA 293
+Y I A+PTF+ K + + F GA
Sbjct: 129 NKYKIEALPTFILFKDGEPCDRFEGA 154
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +3
Query: 63 EAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMP 242
+ +KL+VIDF A WCGPCK + P++ E+A++ S++ V +VDVD D+A Y +P
Sbjct: 40 KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEA-VFARVDVDRLMDVAGTYRAITLP 98
Query: 243 TFVFVKATKKLEEFSGANVD 302
FVFVK ++++ GA D
Sbjct: 99 AFVFVKRGEEIDRVVGAKPD 118
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 75.4 bits (177), Expect = 3e-14
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
I K+ D K ++ K+VV +F ATWCGPCK++ P E+ +E S++ L VDVDE
Sbjct: 28 ITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIEL-SEKHSSLMFLLVDVDE 86
Query: 201 CEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 296
D ++ ++I A PTF F+K +++ + GAN
Sbjct: 87 LSDFSSSWDIKATPTFFFLKNGQQIGKLVGAN 118
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 70.9 bits (166), Expect = 6e-13
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +3
Query: 33 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVD-ECED 209
D D + AGDK+VV+D WCGPCK+I PK E++ + D +V LK+D + + +
Sbjct: 84 DKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQD-MVFLKLDCNQDNKP 142
Query: 210 IAAEYNINAMPTFVFVKATKKLEEFSGANVD 302
+A E I +PTF +K K ++E +GA +
Sbjct: 143 LAKELGIRVVPTFKILKDNKVVKEVTGAKYE 173
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 70.5 bits (165), Expect = 7e-13
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 33 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVD-ECED 209
D D + AG+KLVV+D WCGPCK+I PK + +E D +V LK+D + +
Sbjct: 74 DKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKAL-SEKYDDVVFLKLDCNPDNRP 132
Query: 210 IAAEYNINAMPTFVFVKATKKLEEFSGANVD 302
+A E I +PTF +K K ++E +GA D
Sbjct: 133 LAKELGIRVVPTFKILKDNKVVKEVTGAKYD 163
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
I I + L +AGD+LV++DF TWCG C+ + PKL + A E +I+ LKV+ DE
Sbjct: 96 IDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKE-HPNILFLKVNFDE 154
Query: 201 CEDIAAEYNINAMPTFVFVK-ATKKLEEFS 287
+ + N+ +P F F + A ++E FS
Sbjct: 155 NKSLCKSLNVKVLPYFHFYRGADGQVESFS 184
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 65.7 bits (153), Expect = 2e-11
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
+ I ++ + LS AG++LV+++F TWC C+ + PKL + A E D IV LKV+ DE
Sbjct: 106 VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD-IVFLKVNFDE 164
Query: 201 CEDIAAEYNINAMPTFVFVK-ATKKLEEFS 287
+ + N+ +P F F + A +LE FS
Sbjct: 165 NKPMCKSLNVRVLPFFHFYRGADGQLESFS 194
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 65.7 bits (153), Expect = 2e-11
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
+ I ++ + LS AG++LV+++F TWC C+ + PKL + A E D IV LKV+ DE
Sbjct: 106 VDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPD-IVFLKVNFDE 164
Query: 201 CEDIAAEYNINAMPTFVFVK-ATKKLEEFS 287
+ + N+ +P F F + A +LE FS
Sbjct: 165 NKPMCKSLNVRVLPFFHFYRGADGQLESFS 194
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +3
Query: 48 KTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYN 227
+T++ E+ D V+++F A WCGPC+MI P +D++A + + K++ DE + A Y
Sbjct: 97 QTKVLES-DVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYG 155
Query: 228 INAMPTFVFVKATKKLEEFSGA 293
I ++PT + K +K + GA
Sbjct: 156 IRSVPTVIIFKGGEKKDSIIGA 177
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 65.3 bits (152), Expect = 3e-11
Identities = 23/65 (35%), Positives = 43/65 (66%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
V+++F+ATWCGPCK+I P ++ ++ E D + ++K+D D + AE+ + +P F+ K
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFK 149
Query: 261 ATKKL 275
K++
Sbjct: 150 DGKEV 154
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPT-FVFV 257
VV+DF A WCGPCKMI P ++++A + I K++ DE + +Y + ++PT +FV
Sbjct: 101 VVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFV 160
Query: 258 KATKK 272
KK
Sbjct: 161 GGEKK 165
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 60.9 bits (141), Expect = 6e-10
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPT-F 248
D+ V +DF A WCGPCKMI P ++E+A + + K++ DE +Y + ++PT
Sbjct: 92 DEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIM 151
Query: 249 VFVKATKK 272
+FV KK
Sbjct: 152 IFVNGEKK 159
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/98 (29%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Frame = +3
Query: 12 KMSIH-IKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVL 182
K +H + + + +++EA K++V++F A+WC P K I P E+A+ + S++ +
Sbjct: 39 KGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKTILPIYQELASTYT-SMIFV 97
Query: 183 KVDVDECEDIAAEYNINAMPTFVFVKATKKLEEFSGAN 296
+DV+E + + E+N++A PT VF+K +++++ G +
Sbjct: 98 TIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGD 135
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +3
Query: 27 IKDFDDLKTRLSEAGDKLV--VIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
+K + + LS+A D + V F A WCGPC++I P + E++N+ D + KVD+DE
Sbjct: 54 LKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPD-VTTYKVDIDE 112
Query: 201 --CEDIAAEYNINAMPTFVFVKATKKLEEFSGANV 299
+ + N++A+PT F K K E G +V
Sbjct: 113 GGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDV 147
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 59.3 bits (137), Expect = 2e-09
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +3
Query: 69 GDKLV--VIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMP 242
GD+ V ++DF ATWCGPC ++ +L+ +A E + +++KVD D+ + A + + +P
Sbjct: 91 GDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDDEYEFARDMQVRGLP 150
Query: 243 TFVFV 257
T F+
Sbjct: 151 TLFFI 155
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +3
Query: 27 IKDFDDLKTRLSEAGDKLV--VIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
+K ++ +S+A D + V F A WCGPC+ I P + E++ + D + KVD+DE
Sbjct: 89 VKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYPD-VTTYKVDIDE 147
Query: 201 --CEDIAAEYNINAMPTFVFVKATKKLEEFSGANV 299
+ ++ NI A+PT F K K E GA+V
Sbjct: 148 GGISNTISKLNITAVPTLHFFKGGSKKGEVVGADV 182
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 58.8 bits (136), Expect = 2e-09
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
+V F A WC P + +E+A D++ ++ VDVDE +++A++ + AMPTF+F+K
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALFLI-VDVDEVKEVASQLEVKAMPTFLFLK 85
Query: 261 ATKKLEEFSGANVD 302
+++ GAN D
Sbjct: 86 DGNAMDKLVGANPD 99
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 58.0 bits (134), Expect = 4e-09
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 42 DLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAE 221
DL L AGDKLVV+DF + CG CK + PK+ ++A E + + L+V+ +E +
Sbjct: 103 DLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIA-EKNPEVEFLQVNYEEHRSLCQS 161
Query: 222 YNINAMPTFVFVKATK-KLEEFSGAN 296
NI+ +P F F + + ++ FS N
Sbjct: 162 LNIHVLPFFRFYRGSSGRVCSFSCTN 187
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 IHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
+ I+ + L L AGD+LVV+DF + CG CK + PK+ ++A E + +++ LKV+ +E
Sbjct: 88 LEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLA-ETNPNVMFLKVNQEE 146
Query: 201 CEDIAAEYNINAMPTFVFVK-ATKKLEEFS 287
+ N++ +P F F + A K+ FS
Sbjct: 147 LRTMCHGLNVHVLPFFKFYRGAEGKVCSFS 176
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 27 IKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE 206
I +L L+ AGDKLVV+DF + CG CK + PK+ + A EM+ + L+V+ +E +
Sbjct: 102 ISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFA-EMNPDVQFLQVNYEEHK 160
Query: 207 DIAAEYNINAMPTFVFVKATK-KLEEFSGAN 296
+ ++ +P F F + ++ ++ FS N
Sbjct: 161 SMCYSLGVHVLPFFRFYRGSQGRVCSFSCTN 191
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +3
Query: 99 ATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKATKKLE 278
A WC PCK I P ++A+ S++ + VDV+E + + E+N+ A PT VF+K ++++
Sbjct: 17 APWCVPCKKIEPVFRDLASRYP-SMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMD 75
Query: 279 EFSGA 293
+ GA
Sbjct: 76 KLVGA 80
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 54.4 bits (125), Expect = 5e-08
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTF 248
++ V+++F A WCG C+ + P+ A E+ D +V+ K+D E ++A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 249 VF 254
+F
Sbjct: 180 LF 181
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMS--DSIVVLKVDVDECEDIAAEYNINAMPTF 248
K V+++ A WCG C+ + P +++A + DS+V+ K+D E A+ PT
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAK--AEGFPTI 517
Query: 249 VFVKATKKLEE 281
+F A K E
Sbjct: 518 LFFPAGNKTSE 528
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 54.4 bits (125), Expect = 5e-08
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEM-SDSIVVLKVDVDECEDIAAEYNINAMPTF 248
++ V+++F A WCG C+ + P+ A E+ D +V+ K+D E ++A EY + PT
Sbjct: 120 NQYVLVEFYAPWCGHCQSLAPEYAAAATELKEDGVVLAKIDATEENELAQEYRVQGFPTL 179
Query: 249 VF 254
+F
Sbjct: 180 LF 181
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMS--DSIVVLKVDVDECEDIAAEYNINAMPTF 248
K V+++ A WCG C+ + P +++A + DS+V+ K+D E A+ PT
Sbjct: 460 KDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAK--AEGFPTI 517
Query: 249 VFVKATKKLEE 281
+F A K E
Sbjct: 518 LFFPAGNKTSE 528
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 54.0 bits (124), Expect = 7e-08
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
V+++F +WCGPC+M+ +DE+A + + + ++ D +A EY I A+P + K
Sbjct: 87 VLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFK 146
Query: 261 ATKKLEEFSG 290
+K E G
Sbjct: 147 NGEKRESIMG 156
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMPT 245
DK +++F A WCG CK + P+ +++ + + + S+++ KVD DE + + +Y ++ PT
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPT 99
Query: 246 FV-FVKATKKLEEFSG 290
F K + + +++ G
Sbjct: 100 IQWFPKGSLEPQKYEG 115
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMAN--EMSDSIVVLKVDVDECEDIAAEYNINAMPT 245
+K V+++F A WCG CK + P +++A + + +V+ +D D + + +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 246 F-VFVKATKKLEEFSG 290
F K K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMPT 245
DK +++F A WCG CK + P+ +++ + + + S+++ KVD DE + + +Y ++ PT
Sbjct: 40 DKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPT 99
Query: 246 FV-FVKATKKLEEFSG 290
F K + + +++ G
Sbjct: 100 IQWFPKGSLEPQKYEG 115
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMAN--EMSDSIVVLKVDVDECEDIAAEYNINAMPT 245
+K V+++F A WCG CK + P +++A + + +V+ +D D + + +Y ++ PT
Sbjct: 159 NKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPT 218
Query: 246 F-VFVKATKKLEEFSG 290
F K K ++ G
Sbjct: 219 LKFFPKDNKAGHDYDG 234
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDVDE--CEDIAAEYNINAMPT 245
+V++F A WCG CK + P+ ++ A+ +S + +V+ K+D E + A +Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 246 F-VFVKATKKLEEFSG 290
+F K ++E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMA-NEMSD-SIVVLKVDVDECEDIAAEYNINAMPTF 248
K V+++F A WCG C+ + P LDE+A + SD S+V+ K+D + +++ PT
Sbjct: 393 KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTI 452
Query: 249 VFVKATKKLEEFSG 290
F A+ + + G
Sbjct: 453 YFKSASGNVVVYEG 466
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDVDE--CEDIAAEYNINAMPT 245
+V++F A WCG CK + P+ ++ A+ +S + +V+ K+D E + A +Y + PT
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPT 109
Query: 246 F-VFVKATKKLEEFSG 290
+F K ++E++G
Sbjct: 110 IKIFRNGGKAVQEYNG 125
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMA-NEMSD-SIVVLKVDVDECEDIAAEYNINAMPTF 248
K V+++F A WCG C+ + P LDE+A + SD S+V+ K+D + +++ PT
Sbjct: 393 KNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFPTI 452
Query: 249 VFVKATKKLEEFSG 290
F A+ + + G
Sbjct: 453 YFKSASGNVVVYEG 466
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 51.2 bits (117), Expect = 5e-07
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 78 LVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTF-VF 254
+V+++F A WCG CK + P +++AN + V +D D + A +Y I PT VF
Sbjct: 50 VVLVEFFAPWCGHCKALTPTWEKVANILKGVATVAAIDADAHQSAAQDYGIKGFPTIKVF 109
Query: 255 VKATKKLEEFSGA 293
V + ++ GA
Sbjct: 110 VPGKAPI-DYQGA 121
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +3
Query: 15 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 194
+ ++ +FDDL +E L +++F A WCG CK + P+ A + + + V+
Sbjct: 165 VELNASNFDDLVIESNE----LWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKLGHVNC 220
Query: 195 DECEDIAAEYNINAMPTFV 251
D + I + + + PT +
Sbjct: 221 DVEQSIMSRFKVQGFPTIL 239
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 50.4 bits (115), Expect = 8e-07
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 39 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAA 218
DD+K+ S A VI++ A+WCG C I P +++N S + + D+DEC +
Sbjct: 37 DDIKSSKSPA-----VINYGASWCGVCSQILPAFRKLSNSFS-KLKFVYADIDECPETTR 90
Query: 219 EYNINAMPTFVFVKATKKLEEFSGA 293
+I PTF F + +K++E GA
Sbjct: 91 --HIRYTPTFQFYRDGEKVDEMFGA 113
>At1g76080.1 68414.m08835 thioredoxin family protein low similarity
to thioredoxin (TRX) [Fasciola hepatica] GI:6687568;
contains Pfam profile PF00085: Thioredoxin
Length = 302
Score = 50.4 bits (115), Expect = 8e-07
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 60 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE---CEDIAAEYNI 230
+ G KL+V+D CGPC + P + +++ MS+++V +++ DE C + + N+
Sbjct: 203 NRTGGKLIVLDVGLKHCGPCVKVYPTVLKLSRSMSETVVFARMNGDENDSCMEFLKDMNV 262
Query: 231 NAMPTFVFVK 260
+PTF+F++
Sbjct: 263 IEVPTFLFIR 272
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMA---NEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 251
+ +DF A WCG CK + P+LD A ++ IV+ K++ D+ +A + I+A PT +
Sbjct: 52 IFVDFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNADKYSRLARKIEIDAFPTLM 111
Query: 252 FVKATKKLEEFSGANVD 302
+E + D
Sbjct: 112 LYNHGVPMEYYGPRKAD 128
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPT-F 248
+ +++F A WCG C+ + P+ A E+ + K+D E D+A +Y I PT F
Sbjct: 116 NSFAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATEEGDLAQKYEIQGFPTVF 175
Query: 249 VFV 257
+FV
Sbjct: 176 LFV 178
Score = 35.1 bits (77), Expect = 0.034
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 33 DFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMS--DSIVVLKVDVDECE 206
+FD++ L E+ D V+++ A WCG C+ P +++ + DS+VV K+D E
Sbjct: 446 NFDEIV--LDESKD--VLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVAKMDGTSNE 501
Query: 207 DIAAEYNINAMPTFVFVKATKKLEEFSGANVD 302
A+ + PT +F K + +VD
Sbjct: 502 HPRAK--ADGFPTILFFPGGNKSFDPIAVDVD 531
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +3
Query: 15 MSIHIKDFDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDV 194
+ ++ +FD+L T E L +++F A WCG CK + P+ + AN + + + V+
Sbjct: 166 VELNSSNFDELVTESKE----LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVNC 221
Query: 195 DECEDIAAEYNINAMPTFVFVKATK 269
D + I + + + PT + + K
Sbjct: 222 DAEQSIKSRFKVQGFPTILVFGSDK 246
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +3
Query: 78 LVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTF-VF 254
+V+++F A WCG C+ + P +++A+ + V +D D + ++ +Y + PT VF
Sbjct: 48 VVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATVAAIDADAHKSVSQDYGVRGFPTIKVF 107
Query: 255 VKATKKLEEFSGA 293
V + ++ GA
Sbjct: 108 VPGKPPI-DYQGA 119
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSD---SIVVLKVDVDE--CEDIAAEYNINAMPT 245
+V++F A WCG C+ + P+ ++ A+E+S + + K+D E ++ A EY I PT
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEKAASELSSHNPPLALAKIDASEEANKEFANEYKIQGFPT 108
Query: 246 FVFVK-ATKKLEEFSG 290
++ K +++++G
Sbjct: 109 LKILRNGGKSVQDYNG 124
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD--SIVVLKVDVDECEDIAAEYNINAMPTF 248
K V+I+F A WCG C+ + P LDE+A + S+++ K+D + + +++ PT
Sbjct: 391 KNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFPTI 450
Query: 249 VFVKATKKLEEFSG 290
F A+ + + G
Sbjct: 451 YFRSASGNVVVYEG 464
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 27 IKDFDDLKTRLSEAGD--KLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDE 200
I + ++L LS A + ++I++MA+WC C + PKL+++A E ++ VDV++
Sbjct: 101 INNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNK 160
Query: 201 C-EDIAAEYNINAMPTFVFVKATKKLEEFSGAN 296
+ + NI+ MPT K + EE G +
Sbjct: 161 VPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGH 193
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/82 (23%), Positives = 44/82 (53%)
Frame = +3
Query: 54 RLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNIN 233
+L +++++ + + CGPC+ + P L+++ +E + + +++D++E ++IA I
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 234 AMPTFVFVKATKKLEEFSGANV 299
P F K + L SG +
Sbjct: 496 GTPCVQFFKNKEMLRTISGVKM 517
>At1g07700.3 68414.m00829 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 217
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 60 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDV----DECEDIAA 218
S+ + LVV+DF T CG CK I ++ + D ++ LK +V DE ++A
Sbjct: 116 SKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAE 175
Query: 219 EYNINAMPTFVFVKATKKLEEFS 287
I A+P F F K LE F+
Sbjct: 176 RLRIKAVPLFHFYKNGVLLESFA 198
>At1g07700.1 68414.m00828 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 204
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 60 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDV----DECEDIAA 218
S+ + LVV+DF T CG CK I ++ + D ++ LK +V DE ++A
Sbjct: 103 SKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAE 162
Query: 219 EYNINAMPTFVFVKATKKLEEFS 287
I A+P F F K LE F+
Sbjct: 163 RLRIKAVPLFHFYKNGVLLESFA 185
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 44.4 bits (100), Expect = 6e-05
Identities = 20/72 (27%), Positives = 40/72 (55%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
V++ F A WCGPC+ + P L++M +E + V+ D ++I+ +PT + K
Sbjct: 230 VMVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFK 289
Query: 261 ATKKLEEFSGAN 296
+++ + +GA+
Sbjct: 290 GGEQMAKVTGAD 301
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
VV+ F A+WC K + +A + + +V+ +E +I+ Y++ A+P FVF K
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHF-FRVEAEEHPEISEAYSVAAVPYFVFFK 82
Query: 261 ATKKLEEFSGAN 296
K ++ GA+
Sbjct: 83 DGKTVDTLEGAD 94
>At5g04260.1 68418.m00417 thioredoxin family protein low similarity
to SP|P29429 Thioredoxin. [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile: PF00085
Thioredoxin
Length = 192
Score = 41.1 bits (92), Expect = 5e-04
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 36 FDDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECE-DI 212
FD + + G+ +V++ +MA WC C + PKL+++A E + VDV+ +
Sbjct: 87 FDQVMEDAQKLGESVVIV-WMAAWCRKCIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRL 145
Query: 213 AAEYNINAMPTFVFVKATKKLEEFSGAN 296
+ + MPT + +K E G +
Sbjct: 146 VSRAGVTKMPTIQLWRDGQKQAEVIGGH 173
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMSDSI--VVLKVDVDECEDIAAEY 224
K + + F A WCGPC+ P+L E+ NE+S + ++ V DE E+ +Y
Sbjct: 44 KKIGLYFSAAWCGPCQRFTPQLVEVYNELSSKVGFEIVFVSGDEDEESFGDY 95
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 39 DDLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEM---ANEMSDSIVVLKVDVDECED 209
D K +S+ K +++ F A WC PC+ PKL E+ E +++ ++ + D ++
Sbjct: 352 DGAKVLVSDLVGKTILMYFSAHWCPPCRAFTPKLVEVYKQIKERNEAFELIFISSDRDQE 411
Query: 210 IAAEY 224
EY
Sbjct: 412 SFDEY 416
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +3
Query: 84 VIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKA 263
VI F CK I P +D + SI LKVD+D+C I N+ +PT K
Sbjct: 617 VIHFSTASDHQCKQISPFVDSLCTRYP-SIHFLKVDIDKCPSIGNAENVRVVPTVKIYKN 675
Query: 264 TKKLEE 281
+++E
Sbjct: 676 GSRVKE 681
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 69 GDKLVVIDFMATWCGPCKMIGPKLDEMAN---EMSDSIVVLKVDVDECEDIAAEYNINAM 239
G++ V++ A WC + P+ E A E+ S+++ K+D D IA+E I
Sbjct: 93 GNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDGDRYSKIASELEIKGF 152
Query: 240 PT-FVFVKAT 266
PT +FV T
Sbjct: 153 PTLLLFVNGT 162
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 81 VVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
V++ F+A C C + P+L+ + +E + VD DE ++A +Y I P + K
Sbjct: 45 VIVVFIAKDCAECGSLMPELEFLDSEYEYMLKFYTVDTDEELELAKDYRIEYHPITIVFK 104
Query: 261 ATKKLEEFSG 290
++ E G
Sbjct: 105 GGEEKERVLG 114
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +3
Query: 42 DLKTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSD---SIVVLKVDVDECEDI 212
D RL + + ++V+ + A WC + P+ E A ++ + S+++ K+D + +
Sbjct: 83 DNTKRLIDGNEYVMVLGY-APWCARSAELMPRFAEAATDLKEIGSSVLMAKIDGERYSKV 141
Query: 213 AAEYNINAMPT-FVFVKATKK 272
A++ I PT +FV T +
Sbjct: 142 ASQLEIKGFPTLLLFVNGTSQ 162
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 87 IDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
+ F WC CK +G +++ A E D I V +VD + + I++ PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 261 ATKKLEEFSG 290
+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 87 IDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
+ F WC CK +G +++ A E D I V +VD + + I++ PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 261 ATKKLEEFSG 290
+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +3
Query: 87 IDFMATWCGPCKMIGPKLDEM--ANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVK 260
+ F WC CK +G +++ A E D I V +VD + + I++ PTF+
Sbjct: 48 VKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVDCGTSRAVCTKVEIHSYPTFMLFY 107
Query: 261 ATKKLEEFSG 290
+++ ++ G
Sbjct: 108 NGEEVSKYKG 117
>At1g07700.2 68414.m00827 thioredoxin family protein low similarity
to thioredoxin [Gallus gallus] GI:212766; contains Pfam
profile: PF00085 Thioredoxin
Length = 171
Score = 35.1 bits (77), Expect = 0.034
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +3
Query: 60 SEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDV----DECEDIAA 218
S+ + LVV+DF T CG CK I ++ + D ++ LK +V DE ++A
Sbjct: 103 SKETNSLVVVDFYRTACGSCKYIEQGFSKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAE 162
Query: 219 EYNINAMP 242
I +P
Sbjct: 163 RLRIKVIP 170
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 34.7 bits (76), Expect = 0.045
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 33 DFDDL-KTRLSEAGDKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDEC-E 206
D D L + S+ G+ + + F A+WC + + PK D M + M I L V+ +
Sbjct: 60 DGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFD-MLSSMFPQIQHLAVEHSQALP 118
Query: 207 DIAAEYNINAMPTFVFVKAT 266
+ + Y I+++P+ + V T
Sbjct: 119 SVFSRYGIHSLPSILMVNQT 138
>At5g08290.1 68418.m00976 yellow-leaf-specific protein 8 (YLS8) /
mitosis protein DIM1, putative contains Pfam domain
PF02966: Mitosis protein DIM1; identical to cDNA YLS8
mRNA for Dim1 homolog GI:13122293
Length = 142
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/68 (26%), Positives = 29/68 (42%)
Frame = +3
Query: 72 DKLVVIDFMATWCGPCKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFV 251
++LVVI F W C + L +A + + V+ VD+ E D Y + T +
Sbjct: 23 ERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVM 82
Query: 252 FVKATKKL 275
F K +
Sbjct: 83 FFFRNKHI 90
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 84 VIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDVDECEDIAAEYNINAMPT-FV 251
++ A WC C+ + DE+A++++ S + + D D+ E E + + PT V
Sbjct: 377 IVVLYAPWCPFCQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILV 436
Query: 252 FVKATKK 272
F K + +
Sbjct: 437 FPKNSSR 443
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 84 VIDFMATWCGPCKMIGPKLDEMANEMSDS---IVVLKVDVDECEDIAAEYNINAMPT-FV 251
++ A WC C+ + DE+A+++ S + + D D+ + E + + PT V
Sbjct: 370 IVVLYAPWCPFCQAMEASFDELADKLGGSGVKVAKFRADGDQKDFAKKELQLGSFPTILV 429
Query: 252 FVKATKK 272
F K + +
Sbjct: 430 FPKNSSR 436
>At4g31240.2 68417.m04435 expressed protein
Length = 392
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD 167
K + + F A WC PCK P+L ++ + +
Sbjct: 44 KTICLFFSAIWCRPCKDFTPELIKLYENLQN 74
>At4g31240.1 68417.m04434 expressed protein
Length = 392
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 75 KLVVIDFMATWCGPCKMIGPKLDEMANEMSD 167
K + + F A WC PCK P+L ++ + +
Sbjct: 44 KTICLFFSAIWCRPCKDFTPELIKLYENLQN 74
>At1g64290.1 68414.m07285 F-box protein-related contains TIGRFAM
TIGR01640 : F-box protein interaction domain;
Length = 364
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 200 FVNVDLKNNNGV-GHFVSHLVEFGPDHLAGSAPSRHEVNHDELVARLRQPGLQVIEVLD 27
FVN++L N + G+F+ H + G + R ++ ++ + PG+ IE D
Sbjct: 42 FVNLNLLRTNRISGYFIQHYIVKGHELRTSFVHERSDLQNNGVSIDFLPPGMIKIEACD 100
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 117 CKMIGPKLDEMANEMSDSIVVLKVDVDECEDIAAEYNINAMPTFVFVKATKKLEE 281
CK I +D + S+ LKV++ +C ++ + +PTF K +++E
Sbjct: 650 CKEISTFVDALCVRYP-SLHFLKVEIVKCPEVGNAERVRVVPTFKIYKLGIRMKE 703
>At3g07330.1 68416.m00874 glycosyl transferase family 2 protein
similar to beta-(1-3)-glucosyl transferase GB:AAC62210
GI:3687658 from [Bradyrhizobium japonicum], cellulose
synthase from Agrobacterium tumeficiens [gi:710492] and
Agrobacterium radiobacter [gi:710493]; contains Pfam
glycosyl transferase, group 2 family protein domain
PF00535
Length = 682
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 275 EFLGRLNKHESRHRVDVIFGGDVFAFVNVDLK 180
EF NK R+ DV++ GD AF+ V+++
Sbjct: 8 EFQQWWNKQRDRNNHDVLYAGDDEAFLTVEIR 39
>At4g31580.1 68417.m04485 splicing factor RSZp22 (RSZP22) / 9G8-like
SR protein (SRZ22) identical to RSZp22 protein
[Arabidopsis thaliana] gi|2582645|emb|CAA05352, 9G8-like
SR protein [Arabidopsis thaliana] GI:3435094; contains
Pfam profiles PF00076: RNA recognition motif. (a.k.a.
RRM, RBD, or RNP domain) and PF00098: Zinc knuckle;
identical to cDNA 9G8-like SR protein (SRZ22) GI:3435093
Length = 200
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 135 WARSSCRVRTKSP*SQSRRACRPPPTAWSSSHRSP 31
+ R S R +SP RR+ PPP S RSP
Sbjct: 141 YGRRSYSPRARSPPPPRRRSPSPPPARGRSYSRSP 175
>At4g31040.1 68417.m04408 proton extrusion protein-related contains
weak similarity to Proton extrusion protein pcxA
(Swiss-Prot:P75028) [Synechocystis sp.]
Length = 438
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 308 EXVDVRAGELFEFLGRLNKHESRHRVDVIFG 216
+ +DVR + E + LN+ ++R+R++V G
Sbjct: 252 QTLDVRRNQKLEMVKELNREKARYRLEVEIG 282
>At4g03415.1 68417.m00468 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 453
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 510 FSSHIVFTRTLTSVNY*MKSNKKAFSRLVFTYCFGKQIKGIN 385
FS HIV + LTS+ + S+ K+ S +FT + KGIN
Sbjct: 42 FSDHIVSLQNLTSIPNRITSSSKSRSSCIFTQ---QGRKGIN 80
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 183 KVDVDECEDIAAEYNINAMPTFVFVKATKKLEE 281
KVDV+E +A +I +PTF K +K++E
Sbjct: 632 KVDVEESLALAKAESIKKIPTFKIYKKGEKVKE 664
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,745,090
Number of Sequences: 28952
Number of extensions: 196853
Number of successful extensions: 646
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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