Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H21
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    31   0.007
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   3.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.6  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   7.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 31.5 bits (68), Expect = 0.007
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 460  TVKLEWKEPHS-DLPVVRYKVFWSRRVRGLGGELDSVLVNHQTVPKDQTSIEIKDLQPNS 636
            +V+L W  P   + P+ RY + + +      G  + VLV     P DQT   +  L+P +
Sbjct: 911  SVQLSWVAPFDGNSPITRYMIEYKQSKVSWEGNTERVLV-----PGDQTEAGVFTLRPAT 965

Query: 637  MYFLQVQTISQFG 675
             Y +++   ++ G
Sbjct: 966  TYHIRIVAENEIG 978


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -3

Query: 583 FDD*QEQNPALHPIPVHVYSRIPYNGQLVN 494
           FD+   +   LH + +  Y + PY G +++
Sbjct: 195 FDEVVNELRILHGVEIRDYPKFPYRGVMID 224


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 117 CTSFFFWFIHCW 82
           C+SFF  F HC+
Sbjct: 415 CSSFFQQFFHCY 426


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 526 SRRVRGLGGELDSVLV 573
           SR +RG GGE D + +
Sbjct: 158 SRLLRGKGGECDEITI 173


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 568 LVNHQTVPKDQTSIEIKDLQ 627
           L NH T+P  +   E++++Q
Sbjct: 302 LYNHSTIPLTKEEEELQEMQ 321


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 503 LSVIRYSGVDVYGDWVESWIL 565
           + +  + G+DV G+ +ES IL
Sbjct: 332 IPLTEFEGIDVLGNIIESSIL 352


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 248 KFHSPSLDSSYF 213
           KFH   +D+SYF
Sbjct: 567 KFHDGEVDASYF 578


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,840
Number of Sequences: 336
Number of extensions: 3860
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)