SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H20
         (448 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q961Y1 Cluster: Alpha-crystallin; n=1; Galleria mellone...    43   0.003
UniRef50_A1ZCP6 Cluster: Fibronectin type III domain protein; n=...    35   0.92 
UniRef50_Q9XWT4 Cluster: Putative uncharacterized protein; n=1; ...    34   1.6  
UniRef50_Q4C3K5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_A7CW47 Cluster: Helix-turn-helix-domain containing prot...    33   2.8  
UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY0404...    33   2.8  
UniRef50_Q0IEY5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_A6GNZ7 Cluster: Molecular chaperone; n=1; Limnobacter s...    33   3.7  
UniRef50_A7LCQ0 Cluster: P21; n=4; Trypanosoma cruzi|Rep: P21 - ...    33   3.7  
UniRef50_Q7SBL6 Cluster: Predicted protein; n=1; Neurospora cras...    33   3.7  
UniRef50_A5DP45 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_UPI000150A367 Cluster: TPR Domain containing protein; n...    32   4.9  
UniRef50_Q21P57 Cluster: Transport-associated; n=1; Saccharophag...    32   4.9  
UniRef50_A1VR03 Cluster: Conserved hypothetical signal peptide p...    32   4.9  
UniRef50_A0NG12 Cluster: ENSANGP00000029772; n=13; Culicidae|Rep...    32   4.9  
UniRef50_Q46BK4 Cluster: Putative uncharacterized protein; n=1; ...    32   4.9  
UniRef50_Q2V9E8 Cluster: Putative small heat shock protein hsp20...    32   4.9  
UniRef50_P39768 Cluster: Pair-rule protein odd-paired; n=3; Dipt...    32   4.9  
UniRef50_Q89C37 Cluster: Blr7961 protein; n=10; Proteobacteria|R...    32   6.5  
UniRef50_A3XBD3 Cluster: Putative uncharacterized protein; n=2; ...    32   6.5  
UniRef50_Q7RTC8 Cluster: Cation-transporting ATPase; n=10; Eukar...    32   6.5  
UniRef50_A2BN44 Cluster: Cysteine synthase; n=3; Thermoprotei|Re...    32   6.5  
UniRef50_Q2II74 Cluster: Diacylglycerol kinase; n=1; Anaeromyxob...    31   8.6  
UniRef50_A7HCJ0 Cluster: Diacylglycerol kinase catalytic region;...    31   8.6  

>UniRef50_Q961Y1 Cluster: Alpha-crystallin; n=1; Galleria
           mellonella|Rep: Alpha-crystallin - Galleria mellonella
           (Wax moth)
          Length = 239

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
 Frame = +2

Query: 17  VLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRELDN 196
           ++ L   +S   +   G +    H  HH   +R+    E  FD+      L+  +  LD 
Sbjct: 5   IILLTLLISIESHRHCGRHTSLCHRRHHDRHMRNH---ERSFDS------LARSVISLDR 55

Query: 197 MLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGDVQ 376
            L +          S +  + +EY + + L  + ++ +VVK +  ++ + A  K E   +
Sbjct: 56  SLNELCTD-NNNNRSKEIFKTDEYTIQVSLEDYAKESVVVKIKYRVMYIYAEKKDES--K 112

Query: 377 KNYLDVRTLPDCVNVN-GSWTYSQG 448
            NY ++R LP+ V+V+  +W Y+ G
Sbjct: 113 SNYFELRVLPEIVDVHKATWNYNDG 137


>UniRef50_A1ZCP6 Cluster: Fibronectin type III domain protein; n=1;
            Microscilla marina ATCC 23134|Rep: Fibronectin type III
            domain protein - Microscilla marina ATCC 23134
          Length = 1168

 Score = 34.7 bits (76), Expect = 0.92
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +2

Query: 212  YRKFPTPASSSQGIEGNEYKVT-IPLTSFDEKDIVVKARTG 331
            ++ FP P SSS  IE N YK + I +T+FD K ++ K   G
Sbjct: 1092 FKAFPNPTSSSLIIESNTYKFSKIVVTTFDSKVMIKKNLQG 1132


>UniRef50_Q9XWT4 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 212

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   MIALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSEL 181
           M ALF+  +A AV  +      Y  +  +P HH N   + Y   D  D+    +EL S  
Sbjct: 1   MYALFLSVIACAVVVSANQYNDYGTISHYPGHHSN---NRYSTSDSSDSSE--NELKSRS 55

Query: 182 RELDNMLADFYRKF-PTPASSSQGIEGNEYK 271
              D    ++   + P P +++ G  GNEY+
Sbjct: 56  NS-DERYPEYPGVYAPQPPATNYGTNGNEYR 85


>UniRef50_Q4C3K5 Cluster: Putative uncharacterized protein; n=1;
            Crocosphaera watsonii WH 8501|Rep: Putative
            uncharacterized protein - Crocosphaera watsonii
          Length = 1169

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +2

Query: 158  WSELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGL- 334
            W EL+S+  E  N L  F  K+P   S       + + +   L S DE   ++ A  G+ 
Sbjct: 1070 WLELTSQAEEKINALDGFKEKYPDYLSRIWATHPSSHSIPPQLPSLDELKALLLACQGMV 1129

Query: 335  LMVQAVHKYEGDVQKNY 385
            ++V+ +HK     +K Y
Sbjct: 1130 VVVKNLHKKNPYSKKAY 1146


>UniRef50_A7CW47 Cluster: Helix-turn-helix-domain containing protein
           AraC type; n=1; Opitutaceae bacterium TAV2|Rep:
           Helix-turn-helix-domain containing protein AraC type -
           Opitutaceae bacterium TAV2
          Length = 437

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 20/51 (39%), Positives = 23/51 (45%)
 Frame = -1

Query: 232 GRRELSVEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 80
           GR EL+    EH   LA LA  FG  P+     L  VW  QP   + R  R
Sbjct: 20  GREELTRVASEHGFSLAVLAQHFGCSPSHFASQLQHVW-QQPAAALLREAR 69


>UniRef50_Q7RHE6 Cluster: Putative uncharacterized protein PY04041;
            n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY04041 - Plasmodium yoelii yoelii
          Length = 1521

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 41   SAAPYYGMGYNQMPFHPEHHHNRLRSPYF 127
            + +PY G  YN  P++  HH+   RS YF
Sbjct: 987  NGSPYNGSHYNGSPYNDSHHNESSRSEYF 1015


>UniRef50_Q0IEY5 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1086

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
 Frame = +2

Query: 53  YYGMGYNQMPFHPEHHHNRLRSPYFG-EDVFDTGR----FWSELSSELRELDNMLADFYR 217
           Y  +  + +PFH + +   +R+ + G   +  +GR    FW  +++ L  + N   D YR
Sbjct: 193 YSRLEKSDLPFHDQFYCTCVRNIWIGIMSLSMSGRKHLDFWEHINNALESIRNGRHDLYR 252

Query: 218 KFPTPASS-------SQGIEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKY-EGDV 373
            F  PA+          GI        + + +F E  ++V      L+ +AV +   GD 
Sbjct: 253 NFAPPANDFLFVAWFINGIASLYQYCILDVDTFKESAVIVNPPDYTLLDRAVKEVTHGDK 312

Query: 374 QKNYLDV 394
            +++L +
Sbjct: 313 PEDHLRI 319


>UniRef50_A6GNZ7 Cluster: Molecular chaperone; n=1; Limnobacter sp.
           MED105|Rep: Molecular chaperone - Limnobacter sp. MED105
          Length = 163

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 11/39 (28%), Positives = 25/39 (64%)
 Frame = +2

Query: 230 PASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQ 346
           P  + + +E N Y++++ +  FDEK++ ++   G+L V+
Sbjct: 36  PPYNIEALEENRYQISVAVAGFDEKELELEVERGVLTVR 74


>UniRef50_A7LCQ0 Cluster: P21; n=4; Trypanosoma cruzi|Rep: P21 -
           Trypanosoma cruzi
          Length = 154

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 2   MIALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHN 106
           +  L VL LA +VSA      GYN    H  HHH+
Sbjct: 4   VFVLLVLFLACSVSAVEVMKRGYNHKEPHKRHHHS 38


>UniRef50_Q7SBL6 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 514

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +2

Query: 122 YFGEDVFDTGRFWSELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDE 301
           Y   D+FD+ R +S L  E  +  ++L  ++R FP  A  +  I     K  IPL  +  
Sbjct: 424 YCNLDLFDSERLYSRLGQEFGKF-HLLPVYWRPFPEQAVRNWNILHRRIKGVIPLLEWRS 482

Query: 302 KD 307
           +D
Sbjct: 483 ED 484


>UniRef50_A5DP45 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 217

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 29  AAAVSAAPYYGMGYNQMPFHPEHHHNR 109
           AAAV+ A + G G    P HP+HHH R
Sbjct: 42  AAAVANAQHQGTGPRDGPQHPDHHHVR 68


>UniRef50_UPI000150A367 Cluster: TPR Domain containing protein; n=1;
            Tetrahymena thermophila SB210|Rep: TPR Domain containing
            protein - Tetrahymena thermophila SB210
          Length = 2120

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 25/125 (20%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
 Frame = +2

Query: 83   FHPEHHHNRLRSP----YFGEDVFDTGRFWSELSSELRELDNMLADFYRKFPTPASSSQG 250
            F   H+ N   SP       ED++  G+ + ++  ++ + D M+ ++Y+K  T + S Q 
Sbjct: 1107 FSANHNPNNFTSPDLTISLAEDIYALGQVFEKMLLKIDQQDRMINNWYKKGFTSSLSLQK 1166

Query: 251  IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGDVQKNYLDVRTLPDCVNVNGS 430
            +  N  +        D   +V   +   +     + Y+G  Q ++  ++++    + N S
Sbjct: 1167 LVRNMLEHNKVYKRPDITRVVETLQFESIAAMLYNIYQGPFQ-SFAGMQSITSSASKNNS 1225

Query: 431  WTYSQ 445
              +SQ
Sbjct: 1226 QVFSQ 1230


>UniRef50_Q21P57 Cluster: Transport-associated; n=1; Saccharophagus
           degradans 2-40|Rep: Transport-associated -
           Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM
           17024)
          Length = 222

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 26  LAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSELRE 187
           L+  ++A+ + G G  Q   H EH   R    Y+ E   D+G  W +  S  R+
Sbjct: 16  LSTILAASAFAGSG-TQEKQHEEHREGRTAEQYWKEFKHDSGEAWQDTKSAFRD 68


>UniRef50_A1VR03 Cluster: Conserved hypothetical signal peptide
           protein precursor; n=1; Polaromonas naphthalenivorans
           CJ2|Rep: Conserved hypothetical signal peptide protein
           precursor - Polaromonas naphthalenivorans (strain CJ2)
          Length = 172

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +2

Query: 167 LSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGL 334
           L SELR+ +  LA+  +++       QGIEG  Y+  +   S D KD + ++++ +
Sbjct: 104 LESELRKSEARLAELQKEYNNGEPEKQGIEGRNYQRYLDRIS-DLKDSIARSQSDI 158


>UniRef50_A0NG12 Cluster: ENSANGP00000029772; n=13; Culicidae|Rep:
           ENSANGP00000029772 - Anopheles gambiae str. PEST
          Length = 161

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +2

Query: 11  LFVLCLAAAVSAAPYYGMGYNQMP---FHPEHHHNRLRSPYFGEDVFDTGRFWSELSSEL 181
           + VL L AAVSA  +YG   +  P    H E HH  +   Y   DV D          E 
Sbjct: 35  IVVLALVAAVSAQSHYGHQQHYQPQHYHHEEEHHGPVHYEY-NYDVHDDHTGDVHGQKEA 93

Query: 182 RELDNMLADFY 214
           R+ D+   ++Y
Sbjct: 94  RKDDSTQGEYY 104


>UniRef50_Q46BK4 Cluster: Putative uncharacterized protein; n=1;
           Methanosarcina barkeri str. Fusaro|Rep: Putative
           uncharacterized protein - Methanosarcina barkeri (strain
           Fusaro / DSM 804)
          Length = 405

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 29/106 (27%), Positives = 48/106 (45%)
 Frame = +2

Query: 2   MIALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSEL 181
           ++ +F++ L AA +A    G+   +M F         +  Y    V +TG   SE +S  
Sbjct: 8   LMTIFLISLQAASAADIGIGVSPGKMSFELNPGAQEEQLLY----VINTG---SETASYE 60

Query: 182 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVK 319
             +DN   + +   P+ + S Q  E  E KVT+ + S  E D+  K
Sbjct: 61  INIDNSTYESWFSMPSSSFSLQSGENKEVKVTVTVPSSAETDVDCK 106


>UniRef50_Q2V9E8 Cluster: Putative small heat shock protein hsp20;
           n=1; uncultured crenarchaeote|Rep: Putative small heat
           shock protein hsp20 - uncultured crenarchaeote
          Length = 129

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +2

Query: 179 LRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHK 358
           ++E+ N   +FY     P    +  EG+E  V I L  F +KDI +     +L ++A   
Sbjct: 12  IKEIGNRSREFYEFVMPPVDVYE--EGSELIVVIDLAGFQKKDIHLSIYKDILSIKAKRT 69

Query: 359 YEG 367
            EG
Sbjct: 70  AEG 72


>UniRef50_P39768 Cluster: Pair-rule protein odd-paired; n=3;
           Diptera|Rep: Pair-rule protein odd-paired - Drosophila
           melanogaster (Fruit fly)
          Length = 609

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 59  GMGYNQMPFHPEHHHNRLR 115
           G G+ Q PFH  HHH+++R
Sbjct: 125 GSGFGQHPFHSHHHHHQMR 143


>UniRef50_Q89C37 Cluster: Blr7961 protein; n=10; Proteobacteria|Rep:
           Blr7961 protein - Bradyrhizobium japonicum
          Length = 175

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 140 FDTGRFWSELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVK 319
           F T  FW      L   +  LA   +   TPA      +   Y++T  L   DEKDI V 
Sbjct: 40  FGTDDFWRRPFRSLAGFERNLAQ--KLVSTPAVDVTESD-KAYEITAELPGMDEKDIEVN 96

Query: 320 ARTGLLMVQAVHKYE-GDVQKNY 385
                L ++   K+E  + QK+Y
Sbjct: 97  VANDGLTIKGEKKFEREEKQKDY 119


>UniRef50_A3XBD3 Cluster: Putative uncharacterized protein; n=2;
           Roseobacter|Rep: Putative uncharacterized protein -
           Roseobacter sp. MED193
          Length = 187

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
 Frame = +2

Query: 134 DVFDTGRFWSELSSELR--ELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLT-SFDEK 304
           D F+T   W+          L  +LA F    PTP  + +    N+Y V IPLT + ++ 
Sbjct: 73  DSFETTTIWTTGPQSFTGVPLAELLAQFDIAAPTPGITLEARAVNDYMVEIPLTDAVEDG 132

Query: 305 DIVVKARTGLLM 340
            I+   R G  M
Sbjct: 133 PIIAYLRNGKTM 144


>UniRef50_Q7RTC8 Cluster: Cation-transporting ATPase; n=10;
           Eukaryota|Rep: Cation-transporting ATPase - Plasmodium
           yoelii yoelii
          Length = 1976

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = +2

Query: 257 GNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGDVQKNYLDVRTLPDCVNV 421
           GN+  +   +T +  +D ++KA   L+ ++ V K E D+Q  Y+ +   PD + +
Sbjct: 404 GNDNNL-FDITLYIYRDDIIKAYNLLVQIKGVKKVEYDIQNEYIYILYDPDIIGI 457


>UniRef50_A2BN44 Cluster: Cysteine synthase; n=3; Thermoprotei|Rep:
           Cysteine synthase - Hyperthermus butylicus (strain DSM
           5456 / JCM 9403)
          Length = 406

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 155 FWSELSSE-LRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTG 331
           F+ +++ E LR   + L   YR +PTP    + +  + Y+V   L  ++   + VK R G
Sbjct: 89  FYDDINPEPLRVFKSSLELLYRNWPTPLVRLESLSTDGYRVWAKLEWYNPYSMSVKDRIG 148

Query: 332 LLMV 343
             M+
Sbjct: 149 WYMI 152


>UniRef50_Q2II74 Cluster: Diacylglycerol kinase; n=1;
           Anaeromyxobacter dehalogenans 2CP-C|Rep: Diacylglycerol
           kinase - Anaeromyxobacter dehalogenans (strain 2CP-C)
          Length = 359

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 23  CLAAAVSAAPYYGMGYNQMPF 85
           C+ AA S  PYYG+G    PF
Sbjct: 249 CMMAAASTVPYYGLGLRAFPF 269


>UniRef50_A7HCJ0 Cluster: Diacylglycerol kinase catalytic region;
           n=1; Anaeromyxobacter sp. Fw109-5|Rep: Diacylglycerol
           kinase catalytic region - Anaeromyxobacter sp. Fw109-5
          Length = 382

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 23  CLAAAVSAAPYYGMGYNQMPF 85
           C+ AA S  PYYG+G    PF
Sbjct: 273 CMMAAASTVPYYGLGLRAFPF 293


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,881,219
Number of Sequences: 1657284
Number of extensions: 9232515
Number of successful extensions: 28291
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28275
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -