Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H20
(448 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S45630-1|AAB23453.1| 175|Homo sapiens alpha B-crystallin protein. 31 1.8
M28638-1|AAA52104.1| 175|Homo sapiens protein ( Human alpha-B-c... 31 1.8
BT006770-1|AAP35416.1| 175|Homo sapiens crystallin, alpha B pro... 31 1.8
BC007008-1|AAH07008.1| 175|Homo sapiens crystallin, alpha B pro... 31 1.8
AF007162-1|AAC19161.1| 194|Homo sapiens unknown protein. 31 1.8
X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein. 30 3.1
U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein. 30 3.1
BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein. 30 3.1
BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein. 30 3.1
BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein. 30 3.1
BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein. 30 3.1
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein. 29 7.2
L39211-1|AAC41748.1| 773|Homo sapiens carnitine palmitoyltransf... 29 9.5
BT009791-1|AAP88793.1| 756|Homo sapiens carnitine palmitoyltran... 29 9.5
BC000185-1|AAH00185.1| 756|Homo sapiens carnitine palmitoyltran... 29 9.5
>S45630-1|AAB23453.1| 175|Homo sapiens alpha B-crystallin protein.
Length = 175
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 80 PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 250
PF P H +RL +FGE + ++ F + S LR + A + F T S +
Sbjct: 13 PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69
Query: 251 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 370
+E + + V + + F +++ VK ++ V H+ D
Sbjct: 70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109
>M28638-1|AAA52104.1| 175|Homo sapiens protein ( Human
alpha-B-crystallin gene, 5' end. ).
Length = 175
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 80 PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 250
PF P H +RL +FGE + ++ F + S LR + A + F T S +
Sbjct: 13 PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69
Query: 251 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 370
+E + + V + + F +++ VK ++ V H+ D
Sbjct: 70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109
>BT006770-1|AAP35416.1| 175|Homo sapiens crystallin, alpha B
protein.
Length = 175
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 80 PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 250
PF P H +RL +FGE + ++ F + S LR + A + F T S +
Sbjct: 13 PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69
Query: 251 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 370
+E + + V + + F +++ VK ++ V H+ D
Sbjct: 70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109
>BC007008-1|AAH07008.1| 175|Homo sapiens crystallin, alpha B
protein.
Length = 175
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 80 PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 250
PF P H +RL +FGE + ++ F + S LR + A + F T S +
Sbjct: 13 PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69
Query: 251 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 370
+E + + V + + F +++ VK ++ V H+ D
Sbjct: 70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109
>AF007162-1|AAC19161.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 80 PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 250
PF P H +RL +FGE + ++ F + S LR + A + F T S +
Sbjct: 13 PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69
Query: 251 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 370
+E + + V + + F +++ VK ++ V H+ D
Sbjct: 70 LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109
>X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.
Length = 1190
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 771 LEGQIHPELEGVEIVISEKGASSPLITVF 799
>U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.
Length = 1148
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.
Length = 1222
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831
>BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.
Length = 1100
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 636 LEGQIHPELEGVEIVISEKGASSPLITVF 664
>BC006531-1|AAH06531.2| 807|Homo sapiens NOMO3 protein protein.
Length = 807
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 178 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 92
L G+ PE G+E V++E AS P++ VF
Sbjct: 388 LEGQIHPELEGVEIVISEKGASSPLITVF 416
>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
Length = 1938
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 33 RPCRRHRTTVWGTTKCLSIRNTITIG*EAHTSARTSSIPVGSGPN 167
RPC H+TT GTT +S+ + +H + S + V + P+
Sbjct: 1258 RPCETHQTTSTGTTMSVSVGALLPDATSSHRTVE-SGLEVAAAPS 1301
>L39211-1|AAC41748.1| 773|Homo sapiens carnitine
palmitoyltransferase I protein.
Length = 773
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 301 EGHRCQSPDRSSDGASCS*VRGRCTEELF 387
EG+R + PD S D + S + GRC + F
Sbjct: 425 EGYRSEDPDTSMDSYAKSLLHGRCYDRWF 453
>BT009791-1|AAP88793.1| 756|Homo sapiens carnitine
palmitoyltransferase 1A (liver) protein.
Length = 756
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 301 EGHRCQSPDRSSDGASCS*VRGRCTEELF 387
EG+R + PD S D + S + GRC + F
Sbjct: 425 EGYRSEDPDTSMDSYAKSLLHGRCYDRWF 453
>BC000185-1|AAH00185.1| 756|Homo sapiens carnitine
palmitoyltransferase 1A (liver) protein.
Length = 756
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 301 EGHRCQSPDRSSDGASCS*VRGRCTEELF 387
EG+R + PD S D + S + GRC + F
Sbjct: 425 EGYRSEDPDTSMDSYAKSLLHGRCYDRWF 453
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,456,177
Number of Sequences: 237096
Number of extensions: 1334792
Number of successful extensions: 3564
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3564
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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