Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H20
(448 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical ... 34 0.054
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 29 1.5
U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical pr... 29 2.0
U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z74472-8|CAD54135.1| 75|Caenorhabditis elegans Hypothetical pr... 27 4.7
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 27 6.2
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 27 6.2
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 27 8.2
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 27 8.2
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 8.2
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 27 8.2
>AL032630-4|CAA21561.1| 212|Caenorhabditis elegans Hypothetical
protein Y62H9A.4 protein.
Length = 212
Score = 33.9 bits (74), Expect = 0.054
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 MIALFVLCLAAAVSAAPYYGMGYNQMPFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSEL 181
M ALF+ +A AV + Y + +P HH N + Y D D+ +EL S
Sbjct: 1 MYALFLSVIACAVVVSANQYNDYGTISHYPGHHSN---NRYSTSDSSDSSE--NELKSRS 55
Query: 182 RELDNMLADFYRKF-PTPASSSQGIEGNEYK 271
D ++ + P P +++ G GNEY+
Sbjct: 56 NS-DERYPEYPGVYAPQPPATNYGTNGNEYR 85
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical protein
C11E4.6 protein.
Length = 1170
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 91 RMERHLVVPHTVVRCRRHGRSKTENK 14
RM++ L + T+VRCR + + TEN+
Sbjct: 1143 RMDKSLPIEGTMVRCRHNSQQTTENQ 1168
>U58756-3|AAC48084.2| 181|Caenorhabditis elegans Hypothetical
protein F58F9.3a protein.
Length = 181
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 182 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 310
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U58756-2|AAC48083.2| 322|Caenorhabditis elegans Hypothetical
protein F58F9.3b protein.
Length = 322
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 182 RELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDI 310
+ D +L F + +++QG+E YK+T+ EKD+
Sbjct: 93 KNADGILVFSTNNFASAKATNQGLEIGRYKITVQAVKPSEKDL 135
>U41268-5|AAA82438.1| 349|Caenorhabditis elegans Hypothetical
protein T14G12.6 protein.
Length = 349
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -1
Query: 223 ELSVEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMERHLVVPHTVVRCR 44
EL+ E+G+ + +A A P PT D L + + P +V + + + + RC+
Sbjct: 64 ELTCEIGDFPIAVAAFADSEIPPPTAAADELGILPPNSPEQIVLGLNAYYGL---LQRCK 120
Query: 43 RHGRSKTENK*SD 5
+ + T+NK SD
Sbjct: 121 QWKANFTKNKTSD 133
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 269 KVTIPLT--SFDEKDIVVKARTGLLMVQAVHKYEGDV 373
K T+P T SFD ++ KAR+GL + A H Y DV
Sbjct: 712 KSTLPPTAASFDLHKMLQKARSGLNRLSAEHFYPLDV 748
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 27.5 bits (58), Expect = 4.7
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 269 KVTIPLT--SFDEKDIVVKARTGLLMVQAVHKYEGDV 373
K T+P T SFD ++ KAR+GL + A H Y DV
Sbjct: 712 KSTLPPTAASFDLHKMLQKARSGLNRLSAEHFYPLDV 748
>Z74472-8|CAD54135.1| 75|Caenorhabditis elegans Hypothetical
protein F23H12.8 protein.
Length = 75
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 2 MIALFVLCLAAAVSAAPYYGMGY 70
+++L V+C A + A YYG GY
Sbjct: 8 LVSLLVICAFVAETDAQYYGYGY 30
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 27.1 bits (57), Expect = 6.2
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -1
Query: 439 VSPTSVHIYAVRQCPNIQIILLYIA 365
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 27.1 bits (57), Expect = 6.2
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -1
Query: 439 VSPTSVHIYAVRQCPNIQIILLYIA 365
++P + +Y++R CP Q +L+Y+A
Sbjct: 94 LTPGNYRLYSMRFCPYAQRVLIYLA 118
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 214 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 80
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 214 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 80
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 164 ELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLL 337
E+ S E + A F + P+P IEG + IP TS ++ + +RT ++
Sbjct: 268 EMPSLTVEAPSEEASFEAEQPSPQVPQASIEGPSQQQQIPGTSQQKRQVARGSRTNMI 325
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 164 ELSSELRELDNMLADFYRKFPTPASSSQGIEGNEYKVTIPLTSFDEKDIVVKARTGLL 337
E+ S E + A F + P+P IEG + IP TS ++ + +RT ++
Sbjct: 458 EMPSLTVEAPSEEASFEAEQPSPQVPQASIEGPSQQQQIPGTSQQKRQVARGSRTNMI 515
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1
Query: 214 VEVGEHVVQLA*LAGEFGPEPTGIEDVLAEVWASQPIVMVFRMER 80
+ VG +Q++ + + GP GI D +S P + +FR++R
Sbjct: 797 IPVGTSFLQVSAIDADIGPN--GIVDYFLNESSSSPSIQLFRLDR 839
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,755,151
Number of Sequences: 27780
Number of extensions: 214815
Number of successful extensions: 686
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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