Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H19
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    34   0.075
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    32   0.30 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    32   0.30 
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    28   6.5  

>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 396 IEKCAENCISTPEYNPVCGSDXK-TYKNQGRLFCAPNCGVQVTLARQAPCPSS 551
           +E C+ENC     +NPVC  D K T+ +     CA   G++   +    C  S
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCADMPGIKFGASNWTNCGCS 494


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 426 TPEYNPVCGSDXKTYKNQGRL 488
           T E+  VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 402 KCAENCISTPEYNPVCGSDXKTYKNQ 479
           KC+E C     +  VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 426 TPEYNPVCGSDXKTYKNQGRL 488
           T E+  VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 402 KCAENCISTPEYNPVCGSDXKTYKNQ 479
           KC+E C     +  VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +3

Query: 402 KCAENCIS---TPEYNPVCGSDXKTYKNQGRLFCAPN 503
           +C + C +   T E NP   S+   YKN  R+ C PN
Sbjct: 284 QCVDACETETVTDEANPCKFSNAAKYKNGSRIICGPN 320


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 405 CAENCISTPEYNPVCGSDXKTYKN 476
           C  NC +T E++PVC ++   Y+N
Sbjct: 115 CNHNCTNT-EFDPVCDTNGSVYRN 137


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 411 ENCISTPEYNPVCGSDX-KTYKN 476
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 411 ENCISTPEYNPVCGSDX-KTYKN 476
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,789,216
Number of Sequences: 27780
Number of extensions: 323884
Number of successful extensions: 795
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)