Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H18
(101 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:... 50 8e-06
UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329; Fungi... 40 0.015
UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites ... 38 0.034
UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative; n=... 36 0.18
UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1; Encepha... 36 0.18
UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal ... 36 0.24
UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep... 35 0.42
UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31; Euka... 33 0.97
UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3; Alveola... 32 2.2
UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative; n=... 31 3.9
UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6; ... 31 3.9
>UniRef50_Q7PZX9 Cluster: ENSANGP00000014054; n=2; Culicidae|Rep:
ENSANGP00000014054 - Anopheles gambiae str. PEST
Length = 162
Score = 50.4 bits (115), Expect = 8e-06
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
MTNSKGYRRGTRD+F+R FR HGTI
Sbjct: 1 MTNSKGYRRGTRDMFSRGFRKHGTI 25
>UniRef50_P46778 Cluster: 60S ribosomal protein L21; n=329;
Fungi/Metazoa group|Rep: 60S ribosomal protein L21 -
Homo sapiens (Human)
Length = 160
Score = 39.5 bits (88), Expect = 0.015
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
MTN+KG RRGTR +F+R FR HG +
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVV 25
>UniRef50_Q4KTG5 Cluster: L21; n=2; Metazoa|Rep: L21 - Suberites
domuncula (Sponge)
Length = 160
Score = 38.3 bits (85), Expect = 0.034
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTIH 95
M N+KGYRRGTR LF+R ++ +G H
Sbjct: 1 MVNTKGYRRGTRYLFSREYKKNGVQH 26
>UniRef50_Q4QEX4 Cluster: 60S ribosomal protein l21, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein l21,
putative - Leishmania major
Length = 159
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHG 86
M +S GY+ GTR LFA++FR HG
Sbjct: 1 MVHSYGYKSGTRHLFAKKFRKHG 23
>UniRef50_Q8SRW8 Cluster: 60S ribosomal protein L21; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L21
- Encephalitozoon cuniculi
Length = 160
Score = 35.9 bits (79), Expect = 0.18
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 27 SKGYRRGTRDLFARRFRTHGTIH 95
SKGYRRGTR LF++ R HG H
Sbjct: 3 SKGYRRGTRYLFSQDHRKHGVAH 25
>UniRef50_UPI0001553B37 Cluster: PREDICTED: similar to ribosomal
protein L21; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L21 - Mus musculus
Length = 159
Score = 35.5 bits (78), Expect = 0.24
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
M N+KG RRGTR F+R FR HG +
Sbjct: 1 MRNTKGKRRGTRCTFSRPFRKHGIV 25
>UniRef50_Q7R5F3 Cluster: GLP_165_41283_41762; n=3; Eukaryota|Rep:
GLP_165_41283_41762 - Giardia lamblia ATCC 50803
Length = 159
Score = 34.7 bits (76), Expect = 0.42
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHG 86
MT+S+GYR TR FAR+FR HG
Sbjct: 1 MTHSQGYRCKTRYCFARKFRRHG 23
>UniRef50_Q02753 Cluster: 60S ribosomal protein L21-A; n=31;
Eukaryota|Rep: 60S ribosomal protein L21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 160
Score = 33.5 bits (73), Expect = 0.97
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTIH 95
M S GYR TR +F R FR HG +H
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVH 26
>UniRef50_A3E3H5 Cluster: 60S ribosomal protein I21; n=3;
Alveolata|Rep: 60S ribosomal protein I21 - Pfiesteria
piscicida
Length = 165
Score = 32.3 bits (70), Expect = 2.2
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 21 TNSKGYRRGTRDLFARRFRTHG 86
T S+GYR GTR+ FA+ +RT G
Sbjct: 6 TISRGYRHGTRNKFAKAYRTKG 27
>UniRef50_Q23TC8 Cluster: 60S ribosomal protein L21, putative;
n=9; Oligohymenophorea|Rep: 60S ribosomal protein L21,
putative - Tetrahymena thermophila SB210
Length = 180
Score = 31.5 bits (68), Expect = 3.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
MT+S GYRR TR FA+ ++T G +
Sbjct: 24 MTHSYGYRRQTRKKFAKAYKTKGHV 48
>UniRef50_A2F2S5 Cluster: Ribosomal protein L21e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L21e,
putative - Trichomonas vaginalis G3
Length = 159
Score = 31.5 bits (68), Expect = 3.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 18 MTNSKGYRRGTRDLFARRFRTHG 86
M +++G R TR LFAR+FR HG
Sbjct: 1 MGHTEGLRHATRYLFARKFRKHG 23
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,925,724
Number of Sequences: 1657284
Number of extensions: 1082404
Number of successful extensions: 4301
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4301
length of database: 575,637,011
effective HSP length: 14
effective length of database: 552,435,035
effective search space used: 10496265665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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