Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H18
         (101 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89401-1|CAA61582.1|  160|Homo sapiens ribosomal protein L21 pro...    40   0.002
U25789-1|AAA93231.1|  160|Homo sapiens ribosomal protein L21 pro...    40   0.002
U14967-1|AAA85655.1|  160|Homo sapiens ribosomal protein L21 pro...    40   0.002
CR457032-1|CAG33313.1|  160|Homo sapiens RPL21 protein.                40   0.002
BC104667-1|AAI04668.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC071902-1|AAH71902.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC070330-1|AAH70330.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC070323-1|AAH70323.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC070184-1|AAH70184.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC062981-1|AAH62981.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC007505-1|AAH07505.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
BC001603-1|AAH01603.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
AL159977-1|CAH73745.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002
AB209100-1|BAD92337.1|  163|Homo sapiens ribosomal protein L21 v...    40   0.002
AB061826-1|BAB79464.1|  160|Homo sapiens ribosomal protein L21 p...    40   0.002

>X89401-1|CAA61582.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>U25789-1|AAA93231.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>U14967-1|AAA85655.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>CR457032-1|CAG33313.1|  160|Homo sapiens RPL21 protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC104667-1|AAI04668.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC071902-1|AAH71902.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC070330-1|AAH70330.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC070323-1|AAH70323.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC070184-1|AAH70184.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC062981-1|AAH62981.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC007505-1|AAH07505.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>BC001603-1|AAH01603.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>AL159977-1|CAH73745.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


>AB209100-1|BAD92337.1|  163|Homo sapiens ribosomal protein L21
          variant protein.
          Length = 163

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 4  MTNTKGKRRGTRCMFSRPFRKHGVV 28


>AB061826-1|BAB79464.1|  160|Homo sapiens ribosomal protein L21
          protein.
          Length = 160

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)
 Frame = +3

Query: 18 MTNSKGYRRGTRDLFARRFRTHGTI 92
          MTN+KG RRGTR +F+R FR HG +
Sbjct: 1  MTNTKGKRRGTRYMFSRPFRKHGVV 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,283,789
Number of Sequences: 237096
Number of extensions: 168924
Number of successful extensions: 558
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 76,859,062
effective HSP length: 14
effective length of database: 73,539,718
effective search space used: 1397254642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)