Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H18
         (101 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   2.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   2.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    20   3.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    19   5.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    19   5.6  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 54  PWYHDDNPWSLSY 16
           PW    NPW+  Y
Sbjct: 135 PWRTCGNPWNTRY 147


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 54  PWYHDDNPWSLSY 16
           PW    NPW+  Y
Sbjct: 188 PWRTCGNPWNTRY 200


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -1

Query: 101 WKVDSS-MCAESSGEQ 57
           W+++ S MC + SGE+
Sbjct: 69  WQMERSCMCCQESGER 84


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 5   NKLKYDKLQGLSSWYQG 55
           N+L Y     L+++Y G
Sbjct: 130 NRLNYSAFVNLTAYYDG 146


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 53  PGTTTITLGVCHILAC 6
           PG T I    C  +AC
Sbjct: 307 PGVTMIPACTCKAVAC 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,090
Number of Sequences: 438
Number of extensions: 337
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 14
effective length of database: 140,211
effective search space used:  2664009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)