Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H17
         (449 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23484| Best HMM Match : COesterase (HMM E-Value=0)                  40   0.001
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)                 34   0.062
SB_56154| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.3  
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)                   29   1.3  
SB_56819| Best HMM Match : COesterase (HMM E-Value=0)                  28   3.1  
SB_21174| Best HMM Match : Pox_A32 (HMM E-Value=0.024)                 28   3.1  
SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)                 28   3.1  
SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.1  
SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_32248| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_56597| Best HMM Match : COesterase (HMM E-Value=0)                  28   4.1  
SB_51275| Best HMM Match : Fic (HMM E-Value=0)                         27   5.4  
SB_52640| Best HMM Match : Spot_14 (HMM E-Value=0.25)                  27   5.4  
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)                 27   7.2  
SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)                   27   7.2  
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)                      27   7.2  
SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.5  

>SB_23484| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 586

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 29/126 (23%), Positives = 59/126 (46%)
 Frame = +2

Query: 5   PYQAALAGEMSNVPLITSVTAHEGLYPAAAYQTDPVLLKELESRWEQLASNIFEYNDTLP 184
           P++    G+   VPL++   +HEG +     +    +  E    + Q    +  Y++++P
Sbjct: 318 PHRLREQGDFHRVPLLSGFVSHEGSFLLENARVKYTM--EGMRNFAQHFLRMEFYSNSMP 375

Query: 185 LNKRSVVAAKIKQHYLDGKAVSQDTYPQLVEALSDRLFVVPVGMLAQMHAIKSGQPTYVY 364
            +K S+ A   +      K  S     +++E LSD   + P      +H+ K G PTY++
Sbjct: 376 -DKVSLDALLFQYTPWLDKKDSNKIRKKMIEMLSDSFVIAPTHASLTLHS-KHGAPTYMF 433

Query: 365 RYSYRA 382
            +++R+
Sbjct: 434 EFTHRS 439


>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
          Length = 881

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 257 TYPQLVEALSDRLFVVPVGMLAQMHAIKSG-QPTYVYRYSYRATTSLSNL 403
           TYP++ E  +  +  V  G + Q     SG   T+VY YSYR   S SNL
Sbjct: 176 TYPEIYENTNPHVSSVISGHIQQNDVKFSGYDSTHVYTYSYRIKKSFSNL 225


>SB_56154| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 133

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +2

Query: 74  GLYPAAAYQTDPVLLKELESRWEQLASNIFEYNDTLPLNKRSVVAAKIKQHYLDG 238
           G+YP    +T  +  K   SR++ L +    Y+D + L     V  KIK+  + G
Sbjct: 16  GIYPFHGKETHFLNCKARGSRYDNLNTRSVRYSDAVVLTMAYTVNGKIKKELVGG 70


>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
          Length = 445

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 338 KSGQPTYVYRYSYRATTSLSNLMARNDDDYGVCHAD 445
           K+GQ T ++R +YR    +  L+     D  +C+AD
Sbjct: 106 KAGQDTPLHRAAYRGYEDIVQLLLEKGGDPSICNAD 141


>SB_56819| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 613

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +2

Query: 296 FVVPVGMLAQMHAIKSGQPTYVYRYSYRATTSLSNLMARNDDDYGVCHADD 448
           F  P   +AQ + +K+G PTY Y +S+ +T S      +     GV H D+
Sbjct: 468 FFAPAIRMAQAY-VKAGIPTYFYHFSHWSTFS------KRPKSVGVVHFDE 511


>SB_21174| Best HMM Match : Pox_A32 (HMM E-Value=0.024)
          Length = 702

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 2   YPYQAALAGEMSNVPLITSVTAHEGLYPAAAYQTD 106
           +PY  AL G+ +++P + ++       PAA  QT+
Sbjct: 469 HPYTIALGGQPADIPAVETLECPTQAVPAAGEQTE 503


>SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)
          Length = 804

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 2   YPYQAALAGEMSNVPLITSVTAHEGLYPAAAYQTD 106
           +PY  AL G+ +++P + ++       PAA  QT+
Sbjct: 459 HPYTIALGGQPADIPAVETLDCPTQAVPAAGEQTE 493


>SB_28090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 222

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 86  AAAYQTDPVLLKELE-SRWEQLASNIFEYNDTL 181
           AA Y+TD VL KELE    E L ++  E++D L
Sbjct: 41  AAMYETDKVLAKELERQEMEALENHPCEWSDHL 73


>SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 888

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 227 NVALFSQLQPIVCSKVTCRCTRRCYLRVVPIGTRV 123
           N+AL   L+ I C  V   CT   Y + VP G ++
Sbjct: 414 NIALRRMLRRIPCEDVLRVCTDAIYAKAVPSGVKL 448


>SB_32248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1023

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 227 NVALFSQLQPIVCSKVTCRCTRRCYLRVVPIGTRV 123
           N+AL   L+ I C  V   CT   Y + VP G ++
Sbjct: 666 NIALRRMLRRIPCEDVLRVCTDAIYAKAVPSGVKL 700


>SB_56597| Best HMM Match : COesterase (HMM E-Value=0)
          Length = 505

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 281 LSDRLFVVPVGMLAQMHAIKSGQPTYVYRYSYRATTSL 394
           + D  F  PV   A   A K+G  TY+Y +++R+T S+
Sbjct: 341 MGDTFFFAPVTRTANSLA-KAGISTYMYLFTHRSTFSM 377


>SB_51275| Best HMM Match : Fic (HMM E-Value=0)
          Length = 341

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 167 YNDTLPLNKRSVVAAKIKQHYLDG-KAVSQDTYPQLVEALSDRLFVVPVGMLAQMHAIKS 343
           YN  L  N     A   +Q  L   K + Q+   ++ E   D+LF +P G L    AIK 
Sbjct: 47  YNRALTANPLDSRALANRQRALPKVKQLDQEMLDKIDEK-RDKLFSIPAGSLPMKRAIKE 105

Query: 344 GQPTYVY 364
               ++Y
Sbjct: 106 AYFQHIY 112


>SB_52640| Best HMM Match : Spot_14 (HMM E-Value=0.25)
          Length = 245

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 122 ELESRWEQLASNIFEYNDTLPLNKRSVVAAKIKQHYLDGKAVSQDTYPQLVEALSD 289
           EL   W +++SN+    D   L K       +K+  +DG    +++ P+L + LSD
Sbjct: 170 ELVGNWPRMSSNVRSLQDVYSLLKL------LKKELIDGPQKLENSDPKLQQKLSD 219


>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
          Length = 569

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 22/82 (26%), Positives = 34/82 (41%)
 Frame = +2

Query: 101 TDPVLLKELESRWEQLASNIFEYNDTLPLNKRSVVAAKIKQHYLDGKAVSQDTYPQLVEA 280
           TD  L+ ++ S    L S +  Y  T        V  +   H LD  A   +   + V+ 
Sbjct: 321 TDQHLMSKVFSALPDLTSIVNSYGSTETFLPSGQVVTRHNIHSLDYGATEVNPGFE-VKV 379

Query: 281 LSDRLFVVPVGMLAQMHAIKSG 346
           + D   VVPVG   ++H   +G
Sbjct: 380 VDDEGHVVPVGTPGELHVRGAG 401


>SB_9049| Best HMM Match : SMC_C (HMM E-Value=0.0098)
          Length = 661

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +2

Query: 95  YQTDPVLLKELESRWEQLAS 154
           YQTDP ++KE ESR +++ S
Sbjct: 520 YQTDPNVIKEYESRDKEIKS 539


>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
          Length = 892

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 221 QHYLDGKAVS-QDTYPQLVEALSD-RLFVVPVGMLAQMHAIKSGQPTYVYRYSYRATTS 391
           Q Y  G  V  Q++ P L E      +F  P+G+ +   +I  GQP+  Y     + T+
Sbjct: 652 QEYPPGYGVEGQESQPPLSEYQQQPTIFEQPLGIYSSSQSINQGQPSQGYNAQRNSATT 710


>SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 541

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 16/72 (22%), Positives = 31/72 (43%)
 Frame = +2

Query: 50  ITSVTAHEGLYPAAAYQTDPVLLKELESRWEQLASNIFEYNDTLPLNKRSVVAAKIKQHY 229
           +    +H  +Y       DP L + L   WE+ A+++   ND +   K  +   K++   
Sbjct: 61  VVITASHNPIYDNGVKLVDP-LGEMLNESWEKYATSLANANDLIGALKDVIHETKVEMCK 119

Query: 230 LDGKAVSQDTYP 265
                +++DT P
Sbjct: 120 PGKVFIARDTRP 131


>SB_4260| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 415

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 54  LPSLHMKVFIQLQPIK 101
           +P LH K+F+ LQP+K
Sbjct: 254 MPCLHTKIFLVLQPLK 269


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,321,992
Number of Sequences: 59808
Number of extensions: 285104
Number of successful extensions: 893
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)