Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H14
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 44 7e-05
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 42 3e-04
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 41 9e-04
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 32 0.40
SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8) 29 2.8
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 28 4.9
SB_1509| Best HMM Match : SRR (HMM E-Value=0.22) 28 4.9
SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/142 (19%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
Frame = +3
Query: 171 NVVSSPLGVMMLMLLYKAGAGEGSRAEIDK-FLGNGDYSGVANPYISLSKTFSEMNPDYF 347
N+ SP +++ + + GA + ++ K F D + ++ S + +
Sbjct: 29 NLFYSPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNA-SNSDGNQI 87
Query: 348 TMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDF-SDTKKAADIINQWANEKTRGHIKS 521
MAN+++ + + E+F ++ + +E+ +D+ ++ A D +N+W +KT+ IK+
Sbjct: 88 LMANRLFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKN 147
Query: 522 PISDDTIDPNAAAALFNVIFFQ 587
I + + + L N ++F+
Sbjct: 148 LIPEGMFNKDTILCLVNAVYFK 169
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 324 SEMNPDYFTMANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTK-KAADIINQWANE 497
S++ + NKI+ +++ + E+F R+ Y SE+ +DF + A +N W ++
Sbjct: 48 SDLGYGEIQLVNKIWGHDEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQ 107
Query: 498 KTRGHIKSPISDDTIDPNAAAALFNVIFFQ 587
+T+G+IK I I+ + N ++F+
Sbjct: 108 QTKGNIKELIPHGVINSLTRLIIVNAVYFK 137
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +3
Query: 348 TMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDF-SDTKKAADIINQWANEKTRGHIKS 521
++AN +++ +++ ++FT I + Y +++ +D+ +D + A +NQW E+T+ I
Sbjct: 51 SIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKICD 110
Query: 522 PISDDTIDPNAAAALFNVIFFQ 587
I+ + L N I+F+
Sbjct: 111 LIAPGVFNMLTRLTLVNAIYFK 132
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 333 NPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEV-ETIDFSDTKKAADIINQWANEKTRG 509
+PD + +K T D + + + +SEV E DFS K D + + +EK R
Sbjct: 102 DPDVMERILTERIHDKLTSDSELEPLLNELKSEVAEDYDFSVRKAIVDYVLKDPSEKNRL 161
Query: 510 HIKS 521
HIKS
Sbjct: 162 HIKS 165
>SB_18241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 560 GSCIRIYGVIRDWRF-NMSSGLLISPLINDVS 468
GSC+ GV R W+F +++ G L+S L N V+
Sbjct: 3 GSCLWKLGVFRAWKFGSVNDGFLLSGLSNQVA 34
>SB_22514| Best HMM Match : Drf_FH1 (HMM E-Value=1.8)
Length = 336
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -2
Query: 274 PLPKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSL 140
PLP + + + PS +PA Y S + +T G +TF D+ ++SL
Sbjct: 235 PLPTSATPTGTTPSVSPATYSSPTPVTIQG--STFTFDDNAFLSL 277
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 276 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 422
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
>SB_1509| Best HMM Match : SRR (HMM E-Value=0.22)
Length = 644
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 276 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKFTITVRQY 422
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + + Y
Sbjct: 19 NYSTLSRNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSKNY 69
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 276 DYSGVANPYISLSKTFSEMNPDYFTMA-NKIYVGNKY-TLDEKF-TITVR 416
+YS ++ Y++LSK +S ++ +Y T++ N + Y TL + + T++++
Sbjct: 112 NYSTLSKNYLTLSKNYSTLSKNYLTLSKNYSTLSKNYLTLSKNYLTLSIK 161
>SB_51901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/95 (23%), Positives = 33/95 (34%)
Frame = +3
Query: 219 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 398
K G G G E+ + N + L S N +K+Y+ + +D
Sbjct: 120 KHGFGYGKNGEVILVMPNERLNIKKIMVFELFSVLSGYNFLRILKVDKVYLKKLFLMDNA 179
Query: 399 FTITVRQYQSEVETIDFSDTKKAADIINQWANEKT 503
F+ + S VET F + N AN T
Sbjct: 180 FSTVPGEANSNVETQSFIEASVETFTENMLANHAT 214
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 279 NLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHSCPSMMYTFP*ETAKK 124
N C +TCR+P +Y +LC S K ++ P F AKK
Sbjct: 620 NAQCRQTCRTPPNY---AELCGSLWISRITRKKPNYALPHKRVAFSNSQAKK 668
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/93 (21%), Positives = 39/93 (41%)
Frame = -2
Query: 319 VLLKLMYGLATPL*SPLPKNLSISARLPSPAPALYRSISIITPNGEDTTFLSFDDVYVSL 140
V+ + M G+ P+ +P ++ +P+ P L +I +T +TT L ++
Sbjct: 131 VIPQAMPGMVPPVMAPAGAPIAAPMAIPTQQPDLPNNILFLTNLPMETTELMLSMLFNQF 190
Query: 139 RNCKEVLSMASPKAVLLYSWSEE*NARTLQTAI 41
KEV + + + E A T + A+
Sbjct: 191 PGFKEVRLVPGRSDISFVEFENEVQAGTAKDAL 223
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 282 SGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETIDFSDTK 461
S P+I + T NP++F ++ + + T DE + + + ++ I +K
Sbjct: 279 SNATTPFIVIQNTLEVKNPNFFEVSLSA-LNQQVTWDEHYVVADVSFGNQSVVIPRRSSK 337
Query: 462 KAADI--INQWAN 494
K + +NQ+ N
Sbjct: 338 KMEGLHDMNQYLN 350
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,028,150
Number of Sequences: 59808
Number of extensions: 367377
Number of successful extensions: 1043
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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