Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H09
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p pro...    29   4.0  
AE014298-2571|AAO41694.1|  592|Drosophila melanogaster CG5613-PB...    29   5.2  
AE014298-2570|AAF48729.1|  655|Drosophila melanogaster CG5613-PA...    29   5.2  

>AY075262-1|AAL68129.1|  656|Drosophila melanogaster AT22312p
           protein.
          Length = 656

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 425 QKHLDYYIIIFWSVNSFCY----YVKFLYCLSINHYSIHGVSNLGTSI 294
           QK+ DY  + + +V+ FCY    YV    C  +N    HGV  LGT I
Sbjct: 164 QKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVPVLGTFI 211


>AE014298-2571|AAO41694.1|  592|Drosophila melanogaster CG5613-PB,
           isoform B protein.
          Length = 592

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = -2

Query: 458 NF*HQKAINFIQKHLDYYIIIFWSVNSFCY----YVKFLYCLSINHYSIHGVSNLGTSI 294
           N+   +  +  QK+ DY  + + +V+ FCY    YV    C  +N    HGV  +GT I
Sbjct: 89  NYLEDRHFHSSQKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVPVVGTFI 147


>AE014298-2570|AAF48729.1|  655|Drosophila melanogaster CG5613-PA,
           isoform A protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = -2

Query: 458 NF*HQKAINFIQKHLDYYIIIFWSVNSFCY----YVKFLYCLSINHYSIHGVSNLGTSI 294
           N+   +  +  QK+ DY  + + +V+ FCY    YV    C  +N    HGV  +GT I
Sbjct: 152 NYLEDRHFHSSQKYDDYRFVHWSAVDYFCYFSHDYVTIPPCGWLNAAHRHGVPVVGTFI 210


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,916,554
Number of Sequences: 53049
Number of extensions: 414032
Number of successful extensions: 981
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)