Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H07
(484 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.031
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.040
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.093
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.093
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 32 0.22
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 32 0.22
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 31 0.38
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.50
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.66
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.87
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.87
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 29 1.5
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 28 4.6
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 28 4.6
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 27 6.1
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 27 6.1
SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 27 8.1
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 27 8.1
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 27 8.1
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 27 8.1
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 1 PTSYMRGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
P + G + M G VSYG CG N GVY+N+YE W+R TI
Sbjct: 231 PLACSEGGLWYMYGIVSYGVG-CGVANKFGVYSNMYELTDWVRDTI 275
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 35.1 bits (77), Expect = 0.031
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
F++ G+VS+G C + PG+YT++ +Y+ WI + +
Sbjct: 644 FILHGAVSWGVG-CARKGQPGIYTDIKKYLNWIDNIV 679
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 34.7 bits (76), Expect = 0.040
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
+V G VS+G + CG + G YT V Y+ WI STI
Sbjct: 249 WVSAGIVSWG-EGCGIKGKYGFYTRVESYLSWINSTI 284
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 33.5 bits (73), Expect = 0.093
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 1 PTSYMRGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
P S G+ F + G VS+G + C GVY N+ W+R TI
Sbjct: 239 PLSCSIGSRFYLTGVVSWGHE-CARPKKYGVYANMMRMTSWVRDTI 283
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.5 bits (73), Expect = 0.093
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 16 RGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
+ +V+ G+VSYG ++C T + V+T V Y+ WI I
Sbjct: 686 QSGVWVLHGAVSYGARWCPT-DYYTVFTRVSSYVAWINGKI 725
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 40 GSVSYGPKYCGTRNIPGVYTNVYEYIPWIR 129
G+VSYG KYC T + V+ V Y WI+
Sbjct: 967 GAVSYGMKYCPTTHYT-VFARVASYTDWIK 995
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTIIA 144
+V+ G VS+G + C T V+T V Y+PWI TI+A
Sbjct: 602 WVLRGIVSWGSRECSTEFYT-VFTRVINYMPWI-ETILA 638
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 32.3 bits (70), Expect = 0.22
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTIIA 144
+V+ G VS+G + C T V+T V Y+PWI TI+A
Sbjct: 142 WVLRGIVSWGSRECSTEFYT-VFTRVINYMPWI-ETILA 178
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTII 141
+V G VS+G + CG ++ G YT V Y+ WI T I
Sbjct: 307 WVSAGIVSWG-EGCGQKDKYGFYTRVEPYVHWIIKTAI 343
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 31.1 bits (67), Expect = 0.50
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 40 GSVSYGPKYCGT-RNIPGVYTNVYEYIPWIRSTI 138
G VS+G + C + +N VY V +++PWIR I
Sbjct: 1536 GVVSWGTRTCSSGQNEYTVYARVAQFVPWIRKYI 1569
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
+V+ G +S+G K C + GVYT+V +P+I ST+
Sbjct: 190 WVLTGLMSWGEK-CALPDKYGVYTDVRRMLPFIESTL 225
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 30.7 bits (66), Expect = 0.66
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 31 VMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
V++G +S+G CG GVYT ++ +I WI + I
Sbjct: 331 VLLGVISWGDG-CGKFGKYGVYTRLFNFIDWILNEI 365
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 16 RGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTIIA 144
R + +V+ G S+G C R V+T V ++ WI T+ A
Sbjct: 318 RWSKWVLHGVTSWGDSTCDGRAAYSVFTKVSNFVQWIYRTMAA 360
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 30.3 bits (65), Expect = 0.87
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 19 GNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 126
G +V+ G+VS+G CGT + V+ V +I WI
Sbjct: 267 GGRWVLRGAVSWGQPMCGTDHYT-VFARVSSFIDWI 301
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
+V++G S+ C GVY +V + WIR T+
Sbjct: 1986 WVLMGVTSWSYNGCADSGYAGVYADVVYFKDWIRQTV 2022
>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 361 PPVCATHPAL*VKTPLITTTTVFCI 287
PP+ T P L TPL+ TTT F +
Sbjct: 83 PPLVTTTPPLVTTTPLLVTTTPFLV 107
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 361 PPVCATHPAL*VKTPLITTTT 299
PP+ T P+L TPL+ TTT
Sbjct: 27 PPLVTTTPSLVTTTPLLVTTT 47
>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 347 YTPCTIGKDAPDHNNHGVLYRFFKVSLLPRVI 252
Y P +G+ A H VL RF V LLPR++
Sbjct: 277 YPPVFLGELAVPHGEAKVLERFTFVRLLPRIL 308
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 19 GNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIR 129
G F + G+ S+G C + GVY V +PWI+
Sbjct: 95 GGRFYIHGATSWGYG-CAAPGLYGVYAKVKYLLPWIK 130
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +1
Query: 1 PTSYMRGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
P G+ + ++G++S+G C GVY ++ + W++STI
Sbjct: 300 PLVCKEGDVWYLMGAISWGVG-CARGGRYGVYADMMDLKYWVQSTI 344
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 344 CSADGWKVLGDAERPERHIQRCITLGA 424
C W+ + + RPE+H+ RC LG+
Sbjct: 483 CQQKYWEAVSNP-RPEQHVPRCTNLGS 508
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 40 GSVSYGPKY-CGTRNIPGVYTNVYEYIPWI 126
G VS+G CG N GVY V +++ WI
Sbjct: 326 GVVSWGSSLGCGLPNKYGVYVRVTQFLGWI 355
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 28 FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 126
+ +VG S+G K C G+Y NV Y+ WI
Sbjct: 425 WTLVGVTSWG-KGCARALKYGIYANVRRYLHWI 456
>SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 25 TFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIR 129
++V+ G VS+G C + V+T + +I W++
Sbjct: 3 SWVLRGVVSWGDPKCQAGSFYSVFTRISSFIDWMK 37
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 181 TKEITPPCSHYFRLLLYFLSMVCT-RKRSYIRRGCSLCR 68
T+ I PC HYF +L +C ++Y + GC +C+
Sbjct: 168 TQPIATPCDHYFCVL-----CICEWLDQTYNKSGCPVCK 201
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 16 RGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 126
R + + G VS+G C + VYT V Y+ WI
Sbjct: 139 RNGQWTLYGVVSFGAGNCEVTSYT-VYTKVSNYLDWI 174
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 181 TKEITPPCSHYFRLLLYFLSMVCT-RKRSYIRRGCSLCR 68
T+ I PC HYF +L +C ++Y + GC +C+
Sbjct: 42 TQPIATPCDHYFCVL-----CICEWLDQTYNKSGCPVCK 75
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 181 TKEITPPCSHYFRLLLYFLSMVCT-RKRSYIRRGCSLCR 68
T+ I PC HYF +L +C ++Y + GC +C+
Sbjct: 168 TQPIATPCDHYFCVL-----CICEWLDQTYNKSGCPVCK 201
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 132 TSYP-WYVLVNVRI-YAGDVPCAAIFRSVTDR 43
T YP W V++ + Y G PC ++ + TD+
Sbjct: 405 THYPDWQVIMTKAVRYCGATPCLDVYNTTTDK 436
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 181 TKEITPPCSHYFRLLLYFLSMVCT-RKRSYIRRGCSLCR 68
T+ I PC HYF +L +C ++Y + GC +C+
Sbjct: 168 TQPIATPCDHYFCVL-----CICEWLDQTYNKSGCPVCK 201
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,353,721
Number of Sequences: 59808
Number of extensions: 266583
Number of successful extensions: 737
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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