Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H07
         (484 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.027
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    34   0.062
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    28   3.1  
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 35.1 bits (77), Expect = 0.027
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 28  FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWIRSTI 138
           FV+ G +S+G   C  +  PG+YT V  Y+ WI + I
Sbjct: 225 FVLAGVISWGDG-CAQKKQPGIYTMVAPYLSWISAII 260


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 33.9 bits (74), Expect = 0.062
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 28  FVMVGSVSYGPK----YCGTRNIPGVYTNVYEYIPWIRSTI 138
           +V +G  SYG             PGVYT + +Y+PWI+  I
Sbjct: 242 YVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQGVI 282


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 1   PTSYMRGNTFVMVGSVSYGPKYCGTRNIPGVYTNVYEYIPWI 126
           P    R   + + G VS+G   C    +PGVY NV+    WI
Sbjct: 244 PLMCARDGHWELTGVVSWGIG-CARPGMPGVYGNVHSASTWI 284


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.4
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 172 ITPPCSHYFRLLLYFLSMVCTRKRSYIRRGCSL-CRNISVRN*QIQPLRKCYPSC 11
           I P C     + L+F  +VC    ++ RR  SL  R +  +N Q + +RK   +C
Sbjct: 10  ICPVCEFPSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKNNQCKGMRKNCRAC 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,337,346
Number of Sequences: 27780
Number of extensions: 193555
Number of successful extensions: 566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)