Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H07
         (484 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g09780.1 68416.m01161 protein kinase family protein contains ...    28   3.8  
At1g79480.1 68414.m09263 hypothetical protein low similarity to ...    27   5.0  

>At3g09780.1 68416.m01161 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 775

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = -1

Query: 160 CSHYFRLLLYFLSMVCTRKRSYIRRGCSLCRNIS 59
           CSH F     FLS  CT     I   CSLC+N S
Sbjct: 388 CSHGF-----FLSSSCTANSDRICTPCSLCQNSS 416


>At1g79480.1 68414.m09263 hypothetical protein low similarity to
           beta-1,3-glucanase-like protein GI:9758115 from
           [Arabidopsis thaliana]
          Length = 356

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 400 YVSLRSLGVP*NLPPVCATHP 338
           YVSL  L VP N PP C   P
Sbjct: 46  YVSLPPLSVPGNAPPFCINPP 66


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,671,163
Number of Sequences: 28952
Number of extensions: 177094
Number of successful extensions: 418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)