Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H05
         (569 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    24   4.0  
AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.            23   7.0  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 158 VYKKCYNGTCIVGVNKKV-KGSIAKKAEAYLQAANKPHRHTVAKTKGARMPRLEVVS 325
           + K+    T + GV +K+   SIAK  E   Q     H   + K K  + PR ++ S
Sbjct: 174 IIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSS 230


>AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 209 VKGSIAKK-AEAYLQAANKPHRHTVAKTKGARMPRLEVVSRVASIPIVE 352
           ++  + K+ A  +L+  N+ + H V K        L V ++   +P+++
Sbjct: 1   IRAGLTKELAPVHLEVVNESYMHNVPKGSETHFKVLVVSTQFEGLPLIK 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,684
Number of Sequences: 2352
Number of extensions: 14590
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)