Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H05
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   8.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 168 NVITAHALWALTKKSKVRSLRKPKHTFKPL 257
           N I   A ++L     +  LRK KH   PL
Sbjct: 116 NSIHQRASFSLNTDGDIAGLRKKKHKVNPL 145


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 481 LNSWQGKLNPRGERF 437
           L SW   + PRGE F
Sbjct: 191 LPSWTNNIFPRGELF 205


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 481 LNSWQGKLNPRGERF 437
           L SW   + PRGE F
Sbjct: 206 LPSWTNNIFPRGELF 220


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 213 KVRSLRKPKHTFKPLTNPTDIQWQRR 290
           KV S+     T   LT+P    W+RR
Sbjct: 133 KVCSVNDVNMTITELTDPVKEFWERR 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,024
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)