Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_H02
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein. 177 3e-44
BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protei... 177 3e-44
AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding prote... 177 3e-44
AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding prote... 177 3e-44
AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding prote... 172 7e-43
U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein ... 166 4e-41
AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding prote... 153 3e-37
BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein. 119 5e-27
AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens ... 119 5e-27
AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding prote... 102 9e-22
AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding prote... 62 1e-09
BC093875-1|AAH93875.1| 850|Homo sapiens protocadherin gamma sub... 31 3.3
BC093873-1|AAH93873.1| 850|Homo sapiens protocadherin gamma sub... 31 3.3
AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein. 31 3.3
AF152503-1|AAD43764.1| 850|Homo sapiens protocadherin gamma A10... 31 3.3
AF152319-1|AAD43713.1| 936|Homo sapiens protocadherin gamma A10... 31 3.3
U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein. 29 7.6
>CR456852-1|CAG33133.1| 472|Homo sapiens SELENBP1 protein.
Length = 472
Score = 177 bits (430), Expect = 3e-44
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 401 RS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 167
>BC009084-1|AAH09084.1| 472|Homo sapiens selenium binding protein 1
protein.
Length = 472
Score = 177 bits (430), Expect = 3e-44
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 401 RS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 167
>AL391069-27|CAH70328.1| 472|Homo sapiens selenium binding protein
1 protein.
Length = 472
Score = 177 bits (430), Expect = 3e-44
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 401 RS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 167
>AL391069-25|CAO72164.1| 349|Homo sapiens selenium binding protein
1 protein.
Length = 349
Score = 177 bits (430), Expect = 3e-44
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 51 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 109
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++
Sbjct: 110 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 169
Query: 401 RS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 170 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 209
>AL391069-29|CAO72167.1| 201|Homo sapiens selenium binding protein
1 protein.
Length = 201
Score = 172 bits (418), Expect = 7e-43
Identities = 82/160 (51%), Positives = 116/160 (72%), Gaps = 4/160 (2%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++
Sbjct: 68 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDI 127
Query: 401 RS-FNCSFPHTTHCLATGEIMISTMGDKEENGK-GDLVLI 514
+ +F HT+HCLA+GE+MIS++GD + NGK G LVL+
Sbjct: 128 HAKCELAFLHTSHCLASGEVMISSLGDVKGNGKDGSLVLL 167
>U29091-1|AAB02395.1| 472|Homo sapiens selenium-binding protein
protein.
Length = 472
Score = 166 bits (404), Expect = 4e-41
Identities = 80/161 (49%), Positives = 113/161 (70%), Gaps = 4/161 (2%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 9 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 67
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEM 400
+ +ELHHSGWN SSC + RN L+LP+L S ++V+DVG++P +LHKVI+ ++
Sbjct: 68 LKDELHHSGWNTYSSCFGDSTKSRNKLVLPSLISSRIYVVDVGSEPGPQKLHKVIEPKDI 127
Query: 401 RSFNCSFP--HTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ C HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 128 HA-KCELACLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 167
>AL391069-28|CAO72166.1| 295|Homo sapiens selenium binding protein
1 protein.
Length = 295
Score = 153 bits (372), Expect = 3e-37
Identities = 75/158 (47%), Positives = 104/158 (65%), Gaps = 1/158 (0%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQDYLATVDVNPKSPTYSQVIYRTYTGSVD 226
GPGY++PL+A DYLATVDV+PKSP Y QVI+R ++
Sbjct: 9 GPGYSTPLEAMKG---------------TEAPDYLATVDVDPKSPQYCQVIHRLPMPNLK 53
Query: 227 NELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSEMRS 406
+ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ ++ +
Sbjct: 54 DELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHA 113
Query: 407 -FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 114 KCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 151
>BC032997-1|AAH32997.1| 408|Homo sapiens SELENBP1 protein protein.
Length = 408
Score = 119 bits (287), Expect = 5e-27
Identities = 51/101 (50%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 SVDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSE 397
++ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ +
Sbjct: 3 NLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKD 62
Query: 398 MRS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ + +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 63 IHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 103
>AK023875-1|BAB14709.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ13813 fis, clone THYRO1000358, moderately
similar to SELENIUM-BINDING LIVER PROTEIN. ).
Length = 235
Score = 119 bits (287), Expect = 5e-27
Identities = 51/101 (50%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 SVDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDGSE 397
++ +ELHHSGWN CSSC + R L+LP+L S ++V+DVG++PR P+LHKVI+ +
Sbjct: 3 NLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKD 62
Query: 398 MRS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
+ + +F HT+HCLA+GE+MIS++GD + NGKG VL+D
Sbjct: 63 IHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLD 103
>AL391069-26|CAO72165.1| 126|Homo sapiens selenium binding protein
1 protein.
Length = 126
Score = 102 bits (244), Expect = 9e-22
Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVIYRTYTGS 220
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI+R +
Sbjct: 36 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPN 94
Query: 221 VDNELHHSGWNVCSSCHDNPDMKRNFLILPAL 316
+ +ELHHSGWN CSSC + R L+LP+L
Sbjct: 95 LKDELHHSGWNTCSSCFGDSTKSRTKLVLPSL 126
>AL391069-24|CAO72163.1| 305|Homo sapiens selenium binding protein
1 protein.
Length = 305
Score = 62.1 bits (144), Expect = 1e-09
Identities = 27/63 (42%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 332 FVMDVGTDPRKPRLHKVIDGSEMRS-FNCSFPHTTHCLATGEIMISTMGDKEENGKGDLV 508
++ V DP+ P+ +VI+ ++ + +F HT+HCLA+GE+MIS++GD + NGKG V
Sbjct: 65 YLATVDVDPKSPQYCQVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFV 124
Query: 509 LID 517
L+D
Sbjct: 125 LLD 127
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Frame = +2
Query: 47 GPGYASPLDAFNNGPREEILYVVAVQPDKSKQ--DYLATVDVNPKSPTYSQVI 199
GPGY++PL+A GPREEI+Y+ + + + DYLATVDV+PKSP Y QVI
Sbjct: 31 GPGYSTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVI 82
>BC093875-1|AAH93875.1| 850|Homo sapiens protocadherin gamma
subfamily A, 10 protein.
Length = 850
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 149 LATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGWNVCSSCHDNPDMKRNFLILPAL 316
L D+N PT+SQV Y TY E + G ++ S +PD K N I+ +L
Sbjct: 444 LQVADINDNPPTFSQVSYFTYI----PENNARGASIFSVTALDPDSKENAQIIYSL 495
>BC093873-1|AAH93873.1| 850|Homo sapiens protocadherin gamma
subfamily A, 10 protein.
Length = 850
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 149 LATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGWNVCSSCHDNPDMKRNFLILPAL 316
L D+N PT+SQV Y TY E + G ++ S +PD K N I+ +L
Sbjct: 444 LQVADINDNPPTFSQVSYFTYI----PENNARGASIFSVTALDPDSKENAQIIYSL 495
>AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein.
Length = 1731
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = -3
Query: 402 LISEPSITLCNLG--FLGSVPTSITNTLQECSAGNMRKFLFISGL 274
L+++PS++ +LG++P++ + TL +C AGN F GL
Sbjct: 444 LLTQPSLSAAPFAQRYLGTLPSTGSTTLPQCHAGNATVCGFSGGL 488
>AF152503-1|AAD43764.1| 850|Homo sapiens protocadherin gamma A10
short form protein protein.
Length = 850
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 149 LATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGWNVCSSCHDNPDMKRNFLILPAL 316
L D+N PT+SQV Y TY E + G ++ S +PD K N I+ +L
Sbjct: 444 LQVADINDNPPTFSQVSYFTYI----PENNARGASIFSVTALDPDSKENAQIIYSL 495
>AF152319-1|AAD43713.1| 936|Homo sapiens protocadherin gamma A10
protein.
Length = 936
Score = 30.7 bits (66), Expect = 3.3
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 149 LATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGWNVCSSCHDNPDMKRNFLILPAL 316
L D+N PT+SQV Y TY E + G ++ S +PD K N I+ +L
Sbjct: 444 LQVADINDNPPTFSQVSYFTYI----PENNARGASIFSVTALDPDSKENAQIIYSL 495
>U50078-1|AAD12586.1| 4861|Homo sapiens p532 protein.
Length = 4861
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 359 RKPRLHKVIDGSEMRSFNCSFPHTTHCLATGEIMISTMGDKEENGKGD 502
R+PR + + G E+ +C F H+ + G++ GD G G+
Sbjct: 4123 RRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,192,757
Number of Sequences: 237096
Number of extensions: 1864150
Number of successful extensions: 3751
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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