Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H02
         (524 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical ...   163   9e-41
Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical pr...    55   4e-08
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    28   4.7  
Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>AL023835-5|CAA19490.1|  471|Caenorhabditis elegans Hypothetical
           protein Y37A1B.5 protein.
          Length = 471

 Score =  163 bits (395), Expect = 9e-41
 Identities = 78/162 (48%), Positives = 106/162 (65%)
 Frame = +2

Query: 32  MSCCKGPGYASPLDAFNNGPREEILYVVAVQPDKSKQDYLATVDVNPKSPTYSQVIYRTY 211
           + C  GPGYASP DA   GPREE+L+V A        D + TVDVNP+S T+ QVI R  
Sbjct: 7   LKCHGGPGYASPADAIK-GPREEVLFVTAPNAADGP-DAIFTVDVNPESDTFCQVISRVD 64

Query: 212 TGSVDNELHHSGWNVCSSCHDNPDMKRNFLILPALHSCNVFVMDVGTDPRKPRLHKVIDG 391
              + +E+HH+GWN CSSCHD P  KR+ LI+P L+S  +++++V  + RK  L   I+ 
Sbjct: 65  VPHIGDEVHHTGWNACSSCHDKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIEP 123

Query: 392 SEMRSFNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVLID 517
           S++ S N SFPHT+HCLA G IMIST+G+      G+ +L+D
Sbjct: 124 SKLHSLNLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLD 165


>Z77668-1|CAB01239.1|  576|Caenorhabditis elegans Hypothetical
           protein R11G10.2 protein.
          Length = 576

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
 Frame = +2

Query: 137 KQDYLATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGW--NVCSSCHDNPDMKRNFLILP 310
           ++D +A VD++P S T+  ++   +  S  +E     W  +  S    N  ++RN +I+P
Sbjct: 104 ERDKIALVDLDPTSETFCTILSEVHLTSNGDEPGRMNWAKSAESLGEMNKFVRRN-IIVP 162

Query: 311 ALHSCNVFVMDVGTDPRKPRLHKVIDGSEMRSFNCSFPHTTHCLAT--GEIMISTMGDKE 484
            ++S  ++V  +  +  K  + K I   E+   + S P+    L      + +ST+GD+ 
Sbjct: 163 CMNSGKIYV--IAFENEKLWIEKEIRNDELIRKDVSCPYAVRSLPLKGAPVHVSTLGDRF 220

Query: 485 ENGKGDLVLID 517
            NGKGD +LID
Sbjct: 221 GNGKGDFILID 231


>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
            gene nameprotein 213 protein.
          Length = 1437

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 398  MRSFNCSFPHTTHCLATGEIMISTMGDKEENGKGDLVL 511
            M      FP  +H +AT E  ++ + D+E+  + DL L
Sbjct: 1096 MTKLTSGFPVISHAVATMETAVTKLKDREKGKRDDLSL 1133


>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
 Frame = +2

Query: 263 SCHDNPDMKRNFLILPALH-----SCNVFVMDVGTDPRKPRLHKV 382
           SC+    ++  FL LP L      +CN+ V++ G     PRLH +
Sbjct: 254 SCNPLQIIREGFLQLPDLQVLQLDNCNISVVEAGAFVSLPRLHSM 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,594,279
Number of Sequences: 27780
Number of extensions: 301868
Number of successful extensions: 728
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)