Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_H02
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.63 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.3  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   4.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +2

Query: 110 VVAVQPDKSKQDYLATVDVNPKSPTYSQVIYRTYTGSVDNELHHSGWNVCSS 265
           VV +  DKS + +LATV V   +  +S V      G   N    SG++  +S
Sbjct: 446 VVVISNDKSTEFFLATV-VEEAACRFSAVAQAQLGGERQNGRKDSGYDGAAS 496



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +3

Query: 279 LI*KGIFSYYLRCILAMYLLWTLVLILESQ 368
           +I   + S+Y+ CI+ ++L + +   L ++
Sbjct: 344 IIYSSLSSFYIPCIIMVFLYYNIFKALRNR 373


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 305 LPALHSCNVFVMDVGTDPRK 364
           LP LH    F  D G+D R+
Sbjct: 31  LPILHEWKFFDYDFGSDERR 50


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 345 TSITNTLQECSAGNMRKFLF 286
           +S   TL +C A N R++LF
Sbjct: 664 SSNNKTLCKCDAQNCRRYLF 683


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 305 LPALHSCNVFVMDVGTDPRK 364
           LP LH    F  D G+D R+
Sbjct: 31  LPILHEWKFFDYDFGSDERR 50


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 305 LPALHSCNVFVMDVGTDPRK 364
           LP LH    F  D G+D R+
Sbjct: 31  LPILHEWKFFDYDFGSDERR 50


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 266 CHDNPDMKR 292
           CH NPD KR
Sbjct: 15  CHGNPDAKR 23


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 120  TATT*RISSLGPLLKASNG 64
            T+ T RIS + P L A+NG
Sbjct: 1094 TSQTIRISWMSPPLSAANG 1112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,721
Number of Sequences: 438
Number of extensions: 3653
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)