Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G23
(241 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35451| Best HMM Match : Ribosomal_L36e (HMM E-Value=0) 72 6e-14
SB_6230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77
SB_47530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 27 1.8
SB_27155| Best HMM Match : Dynein_heavy (HMM E-Value=1.1e-09) 27 1.8
SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09) 27 3.1
SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 27 3.1
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 3.1
SB_26304| Best HMM Match : RVT_1 (HMM E-Value=2.3e-27) 27 3.1
SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27) 27 3.1
SB_25074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_15856| Best HMM Match : RVT_1 (HMM E-Value=1.3e-27) 27 3.1
SB_6874| Best HMM Match : RnaseH (HMM E-Value=1.6) 27 3.1
SB_3691| Best HMM Match : DUF1520 (HMM E-Value=5.7) 27 3.1
SB_58785| Best HMM Match : RnaseH (HMM E-Value=0.37) 27 3.1
SB_51857| Best HMM Match : zf-CCHC (HMM E-Value=0.0048) 27 3.1
SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 3.1
SB_37459| Best HMM Match : DUF1520 (HMM E-Value=5.7) 27 3.1
SB_30990| Best HMM Match : RhoGEF (HMM E-Value=2.1) 27 3.1
SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 27 3.1
SB_28242| Best HMM Match : RVT_1 (HMM E-Value=2.2e-27) 27 3.1
SB_25606| Best HMM Match : RnaseH (HMM E-Value=1.6) 27 3.1
SB_22848| Best HMM Match : RVT_1 (HMM E-Value=5.1e-15) 27 3.1
SB_8019| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28) 27 3.1
SB_5227| Best HMM Match : RnaseH (HMM E-Value=1.8) 27 3.1
SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_2983| Best HMM Match : RnaseH (HMM E-Value=1.6) 27 3.1
SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_37382| Best HMM Match : Pkinase (HMM E-Value=1e-04) 25 7.2
SB_32158| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4) 25 9.5
SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19) 25 9.5
SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_2480| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 25 9.5
SB_18177| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_2127| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16) 25 9.5
>SB_35451| Best HMM Match : Ribosomal_L36e (HMM E-Value=0)
Length = 100
Score = 72.1 bits (169), Expect = 6e-14
Identities = 38/71 (53%), Positives = 46/71 (64%)
Frame = +3
Query: 27 IAIGLRKGHKTTKISAGKKGITDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQYEKR 206
+A+GL+KGHK TK K +P+R KG K KFVRD+VREVVG A YEKR
Sbjct: 1 MAVGLQKGHKVTK----------NVTKPKPSRRKGASNKRVKFVRDVVREVVGFAPYEKR 50
Query: 207 AMELLKVSKDK 239
MELL++ KDK
Sbjct: 51 VMELLRIGKDK 61
>SB_6230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 28.7 bits (61), Expect = 0.77
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 126 KGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDK 239
+G++ K + ++ E GHA Y+K L KVS+++
Sbjct: 32 RGLRKVSRKHAQRILDETAGHASYKKEHRGLRKVSREQ 69
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 126 KGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSK 233
+G++ K R ++ E GH Y+K L KVS+
Sbjct: 88 RGLRKVSRKHARRILDETAGHNTYKKEHRGLRKVSR 123
>SB_47530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 939
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 119 SWPNFNGFVCNTLFASGYLCRFV-AFSQTNCDFKSG 15
S P NG C L AS Y C + F+ TNC +K G
Sbjct: 189 STPCLNGGTCVDLVAS-YRCDCIKGFNGTNCQYKLG 223
>SB_31885| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 922
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY-EKRAMELLKVSK 233
TDK +K+ PA+++ I S + V+ ++G AQY K +L ++K
Sbjct: 659 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQYLAKSCPQLSDITK 707
>SB_27155| Best HMM Match : Dynein_heavy (HMM E-Value=1.1e-09)
Length = 1248
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 111 RPARLKGIQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKD 236
RP +L+ I+ + +VR L + G +Y + L++ SKD
Sbjct: 625 RPNKLQVIKLSDANYVRTLENSIQGGIEYLRLGDHLVEFSKD 666
>SB_24| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 618 TDKGLKVNPAKVRAIVDMPSPTDKLGVQRLLGLAQY 653
>SB_59142| Best HMM Match : RVT_1 (HMM E-Value=2.5e-09)
Length = 772
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 653 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 688
>SB_53136| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 934
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 587 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 622
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 127 FSLAGLILMALSVIPFLPADIFVVLWPFRRPIAISN 20
FS A + L+V+ L + I V LW +RP A S+
Sbjct: 211 FSFAFFYAIPLAVVIVLYSAIMVTLWMHKRPGAFSS 246
>SB_26304| Best HMM Match : RVT_1 (HMM E-Value=2.3e-27)
Length = 372
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 277 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 312
>SB_26129| Best HMM Match : RVT_1 (HMM E-Value=1.2e-27)
Length = 1036
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 659 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 694
>SB_25074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 576 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 611
>SB_15856| Best HMM Match : RVT_1 (HMM E-Value=1.3e-27)
Length = 514
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 258 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 293
>SB_6874| Best HMM Match : RnaseH (HMM E-Value=1.6)
Length = 349
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 135 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 170
>SB_3691| Best HMM Match : DUF1520 (HMM E-Value=5.7)
Length = 219
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 72 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 107
>SB_58785| Best HMM Match : RnaseH (HMM E-Value=0.37)
Length = 279
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 16 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 51
>SB_51857| Best HMM Match : zf-CCHC (HMM E-Value=0.0048)
Length = 438
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 334 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 369
>SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 1125
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 127 FSLAGLILMALSVIPFLPADIFVVLWPFRRPIAISN 20
FS A + L+V+ L + I V LW +RP A S+
Sbjct: 954 FSFAFFYAIPLAVVIVLYSAIMVTLWMHKRPGAFSS 989
>SB_37459| Best HMM Match : DUF1520 (HMM E-Value=5.7)
Length = 219
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 72 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 107
>SB_30990| Best HMM Match : RhoGEF (HMM E-Value=2.1)
Length = 261
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 16 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 51
>SB_28694| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 1045
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 620 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 655
>SB_28242| Best HMM Match : RVT_1 (HMM E-Value=2.2e-27)
Length = 381
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 277 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 312
>SB_25606| Best HMM Match : RnaseH (HMM E-Value=1.6)
Length = 343
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 109 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 144
>SB_22848| Best HMM Match : RVT_1 (HMM E-Value=5.1e-15)
Length = 630
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 169 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 204
>SB_8019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 16 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 51
>SB_7494| Best HMM Match : RVT_1 (HMM E-Value=4.6e-28)
Length = 960
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 560 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 595
>SB_5227| Best HMM Match : RnaseH (HMM E-Value=1.8)
Length = 334
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 16 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 51
>SB_3197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 595 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 630
>SB_2983| Best HMM Match : RnaseH (HMM E-Value=1.6)
Length = 279
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ PA+++ I S + V+ ++G AQY
Sbjct: 16 TDKGLKVDPAKVRAIVDMPSPTDKLGVQRLLGLAQY 51
>SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 26.2 bits (55), Expect = 4.1
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2
Query: 78 CQRISLSFCGLF 43
C+RIS SFCG+F
Sbjct: 1206 CRRISASFCGIF 1217
>SB_18583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 169 FVKLLGTHSMRRGQWNC 219
F+ G+H RRG++NC
Sbjct: 734 FITSFGSHGERRGEFNC 750
>SB_37382| Best HMM Match : Pkinase (HMM E-Value=1e-04)
Length = 177
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 72 AGKKGITDKAIKIRPARLKG 131
AG++G+ KAIK+ P LKG
Sbjct: 27 AGERGMCCKAIKLAPEVLKG 46
>SB_32158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 78 CQRISLSFCGLFADQL 31
C+R +LSFCG F Q+
Sbjct: 87 CRRFALSFCGAFLCQM 102
>SB_56025| Best HMM Match : Keratin_B2 (HMM E-Value=0.4)
Length = 187
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/59 (23%), Positives = 21/59 (35%)
Frame = -3
Query: 191 CVPNNFTNQIADKLRVFGLNAL*PSWPNFNGFVCNTLFASGYLCRFVAFSQTNCDFKSG 15
C +F N RV+ + S+ N C + G CR C+F+ G
Sbjct: 35 CATFSFANTTG--FRVYAKSCTYESYCTANNTFCKNIHQGGDQCRVQCCEPDRCNFQKG 91
>SB_46967| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-19)
Length = 341
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 118 AGLILMALSVIPFLPADIFVVL 53
AG++LM+L +I F + +F+VL
Sbjct: 193 AGIVLMSLVLIAFALSSVFLVL 214
>SB_10970| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 107 FNGFVCNTLFASGYLCRFVAFSQ 39
F G CNT GY + +A++Q
Sbjct: 354 FTGPACNTSLGEGYWTQHIAYNQ 376
>SB_2480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
TDK +K+ P +++ I S + V+ ++G AQY
Sbjct: 169 TDKGLKVDPVKVRAIVDMPSPTDKLGVQRLLGLAQY 204
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 54 KTTKISAGKKGITDKAIKIRPA-----RLKGIQTKHSKFVRDLVREVVGHAQYEKRAMEL 218
KT ++S K I +K +++ +KG+Q K K DL + V Q + A
Sbjct: 549 KTVELSNAKADIEEKNSQLQTVYKELKSVKGLQEKTEKERDDLKLQQVKEEQLQAMASSQ 608
Query: 219 LKVSKDK 239
+SK+K
Sbjct: 609 DSISKEK 615
>SB_18177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 90 TDKAIKIRPARLKGIQTKHSKFVRDLVREVVGHAQY 197
T +K+ PA++K IQ + + V+ ++G AQY
Sbjct: 508 TGDGLKVDPAKVKAIQEMPAPTDKAGVQRLLGVAQY 543
>SB_2127| Best HMM Match : 7tm_1 (HMM E-Value=8.4e-16)
Length = 300
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 200 LILCVPNNFTNQIADKLRVFGL 135
L+LC +NF N +A + +F L
Sbjct: 36 LVLCKTSNFLNDLATAVSIFSL 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,020,048
Number of Sequences: 59808
Number of extensions: 134990
Number of successful extensions: 422
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 16,821,457
effective HSP length: 57
effective length of database: 13,412,401
effective search space used: 295072822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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