Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G22
         (324 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   3.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   5.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    20   5.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    20   5.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    20   5.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    20   5.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    20   5.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           20   5.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    20   5.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    20   5.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   9.9  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 318 PCHYICSNGQPPPCSRAQSARSGCT*STSPA 226
           P HY   +G  PP S  Q     C+ S +P+
Sbjct: 24  PPHYNIHHGATPPQSPNQQYTKDCS-SPTPS 53


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 23  QPTMGDYTQLQPQR 36


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 5.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 218 QPAAGEVLQVQPDR 259
           QP  G+  Q+QP R
Sbjct: 67  QPTMGDYTQLQPQR 80


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 243 KCNRTGHFARDCKEEADRCYRCNGT 317
           KC R  +  + CK  A   Y  NGT
Sbjct: 787 KCKRIYNEKQCCKNCARVDYSMNGT 811


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,753
Number of Sequences: 336
Number of extensions: 1150
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)