Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G22
(324 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 77 1e-14
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 69 2e-12
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 69 2e-12
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 67 1e-11
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 66 2e-11
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 65 4e-11
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 65 4e-11
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 65 4e-11
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 65 4e-11
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 62 4e-10
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 62 4e-10
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 59 3e-09
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 41 7e-04
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 40 0.002
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 37 0.012
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 37 0.012
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 37 0.016
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 37 0.016
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 37 0.016
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 33 0.20
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 33 0.20
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 33 0.20
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 33 0.20
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 33 0.20
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 33 0.20
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 33 0.20
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 33 0.26
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 33 0.26
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 33 0.26
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 33 0.26
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 33 0.26
AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens ... 33 0.26
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 32 0.35
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 32 0.35
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 31 0.60
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 31 0.60
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 31 0.60
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 31 0.60
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 31 0.60
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 31 0.60
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 31 0.60
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 31 0.60
AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens ... 31 0.80
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 31 1.1
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 31 1.1
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 31 1.1
AF284337-1|AAG14458.1| 221|Homo sapiens SEBOX protein. 31 1.1
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 31 1.1
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 31 1.1
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 31 1.1
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 31 1.1
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 31 1.1
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 31 1.1
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 31 1.1
EF152355-1|ABN42510.1| 135|Homo sapiens B cell maturation antig... 30 1.8
AY684975-1|AAV92616.1| 135|Homo sapiens tumor necrosis factor r... 30 1.8
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 29 3.2
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 29 3.2
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 29 3.2
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 29 3.2
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 29 3.2
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 29 4.3
BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 4.3
BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein. 29 4.3
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 29 4.3
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 29 4.3
BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein. 29 4.3
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 29 4.3
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 29 4.3
AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein. 29 4.3
AL122085-1|CAB59258.1| 111|Homo sapiens hypothetical protein pr... 29 4.3
AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein. 29 4.3
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 29 4.3
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 29 4.3
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 28 5.6
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 28 5.6
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 28 5.6
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 28 5.6
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 28 5.6
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 28 5.6
BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domai... 28 5.6
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 28 5.6
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 28 5.6
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 28 5.6
AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens ... 28 5.6
AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens ... 28 5.6
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 28 5.6
X55110-1|CAA38908.1| 143|Homo sapiens neurite outgrowth-promoti... 28 7.4
M94250-1|AAA59850.1| 143|Homo sapiens retinoic acid inducible f... 28 7.4
M69148-1|AAA58478.1| 143|Homo sapiens midkine protein. 28 7.4
D10604-1|BAA01457.1| 143|Homo sapiens midkine protein. 28 7.4
BC039249-1|AAH39249.1| 301|Homo sapiens C10orf56 protein protein. 28 7.4
BC018612-1|AAH18612.1| 871|Homo sapiens zinc finger protein 473... 28 7.4
BC011704-1|AAH11704.1| 143|Homo sapiens midkine (neurite growth... 28 7.4
AF454744-1|AAL51029.1| 871|Homo sapiens zinc finger protein ZFP... 28 7.4
AB032967-1|BAA86455.1| 914|Homo sapiens KIAA1141 protein protein. 28 7.4
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 27 9.8
L19182-1|AAA16187.1| 277|Homo sapiens MAC25 protein. 27 9.8
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 27 9.8
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 27 9.8
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 27 9.8
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 27 9.8
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 27 9.8
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 27 9.8
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 27 9.8
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 27 9.8
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 77.0 bits (181), Expect = 1e-14
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQREKCFKCNRTGHFARDCKEE 287
MSS+ C+KC R+GH+AREC GG R GF R+ C++C +GH A+DC +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQ 60
Query: 288 ADRCYRCNGTGH 323
D CY C GH
Sbjct: 61 EDACYNCGRGGH 72
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 59 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 109
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 110 YSCGEFGH 117
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 88 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 147
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 148 CYRCGESGH 156
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 109 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 165
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 141 SKTSEVNCYRCGESGHLARECT 162
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGG-----VGARDAGF----NRQREKCFKCNRTGHFARDC 278
MSS+ C+KC R+GH+AREC GG + +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 279 KEEADRCYRCNGTGH 323
+ D CY C GH
Sbjct: 61 DLQEDACYNCGRGGH 75
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 112
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 113 YSCGEFGH 120
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 150
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 151 CYRCGESGH 159
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 168
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGG-----VGARDAGF----NRQREKCFKCNRTGHFARDC 278
MSS+ C+KC R+GH+AREC GG + +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 279 KEEADRCYRCNGTGH 323
+ D CY C GH
Sbjct: 61 DLQEDACYNCGRGGH 75
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 62 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 112
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 113 YSCGEFGH 120
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 91 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 150
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 151 CYRCGESGH 159
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 112 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 168
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 11/77 (14%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFKCNRTGHFARDC 278
MSS+ C+KC R+GH+AREC G G+ +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 279 --KEEADRCYRCNGTGH 323
+E+ + CY C GH
Sbjct: 61 DLQEDVEACYNCGRGGH 77
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFAREC----TQGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 93 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 152
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 153 CYRCGESGH 161
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C E C+ C R GH A+DCKE + +R CY
Sbjct: 46 ICYRCGESGHLAKDCD----------LQEDVEACYNCGRGGHIAKDCKEPKREREQCCYN 95
Query: 306 CNGTGH 323
C GH
Sbjct: 96 CGKPGH 101
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 114 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 170
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 146 SKTSEVNCYRCGESGHLARECT 167
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 10/76 (13%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQG-----GVGARDAGF----NRQREKCFKCNRTGHFARDC 278
MSS+ C+KC R+GH+AREC G G+ +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 279 K-EEADRCYRCNGTGH 323
+E + CY C GH
Sbjct: 61 DLQEDEACYNCGRGGH 76
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFAREC----TQGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 92 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 151
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 152 CYRCGESGH 160
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 113 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 169
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 145 SKTSEVNCYRCGESGHLARECT 166
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCKEEADRCYRCNGTGH 323
GH A+DC + D CY C GH
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGH 82
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 119
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 120 YSCGEFGH 127
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C + Q + C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 306 CNGTGH 323
C GH
Sbjct: 101 CGKPGH 106
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 157
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 158 CYRCGESGH 166
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCKEEADRCYRCNGTGH 323
GH A+DC + D CY C GH
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGH 82
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 119
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 120 YSCGEFGH 127
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C + Q + C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 306 CNGTGH 323
C GH
Sbjct: 101 CGKPGH 106
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 157
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 158 CYRCGESGH 166
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCKEEADRCYRCNGTGH 323
GH A+DC + D CY C GH
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGH 82
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 119
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 120 YSCGEFGH 127
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C + Q + C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 306 CNGTGH 323
C GH
Sbjct: 101 CGKPGH 106
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 157
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 158 CYRCGESGH 166
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 16/82 (19%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCKEEADRCYRCNGTGH 323
GH A+DC + D CY C GH
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGH 82
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK-CFKCNRTGHFARDCKE-EADRC 299
+ CY C R GH A++C + R+RE+ C+ C + GH ARDC + +C
Sbjct: 69 LQEDACYNCGRGGHIAKDCKEP---------KREREQCCYNCGKPGHLARDCDHADEQKC 119
Query: 300 YRCNGTGH 323
Y C GH
Sbjct: 120 YSCGEFGH 127
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C + Q + C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 306 CNGTGH 323
C GH
Sbjct: 101 CGKPGH 106
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 98 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 157
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 158 CYRCGESGH 166
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 119 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 17/83 (20%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCK-EEADRCYRCNGTGH 323
GH A+DC +E + CY C GH
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGH 83
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFAREC----TQGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 158
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 159 CYRCGESGH 167
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C ++ E C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKEPKREREQCCYN 101
Query: 306 CNGTGH 323
C GH
Sbjct: 102 CGKPGH 107
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 176
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 17/83 (20%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD------AGFNRQR----------EKCFKCNRT 257
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 258 GHFARDCK-EEADRCYRCNGTGH 323
GH A+DC +E + CY C GH
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGH 83
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = +3
Query: 141 CYKCNRTGHFAREC----TQGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKEEAD-R 296
CY C + GH AR+C Q + G ++ + KC++C TGH A +C + ++
Sbjct: 99 CYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVN 158
Query: 297 CYRCNGTGH 323
CYRC +GH
Sbjct: 159 CYRCGESGH 167
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 305
+CY+C +GH A++C ++ E C+ C R GH A+DCKE + +R CY
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKEPKREREQCCYN 101
Query: 306 CNGTGH 323
C GH
Sbjct: 102 CGKPGH 107
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ------GGVGARDAGFNRQRE-KCFKCNRTGHFARDCKEEA 290
CY C GH ++CT+ G G ++ E C++C +GH AR+C EA
Sbjct: 120 CYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEA 176
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN 311
++CY C R+GH A++C +D R R+ C+ C R GH ARDC +++ +CY C
Sbjct: 65 NICYNCGRSGHIAKDC-------KDPKRER-RQHCYTCGRLGHLARDCDRQKEQKCYSCG 116
Query: 312 GTGH 323
GH
Sbjct: 117 KLGH 120
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREK---------CFKCNRTGHFARDC 278
MSS + C +GH+AR C +GG G R G + + + C+ C +G A++C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 279 KEEADRCYRCNGTGH 323
+ CY C +GH
Sbjct: 61 VLLGNICYNCGRSGH 75
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +3
Query: 141 CYKCNRTGHFARECT----QGGVGARDAGFNRQ---REKCFKCNRTGHFARDCKE 284
CY C R GH AR+C Q G ++ + KC++C GH A +C +
Sbjct: 91 CYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGEIGHVAINCSK 145
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 41.1 bits (92), Expect = 7e-04
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 234 KCFKCNRTGHFARDCKEEAD-RCYRCNGTGH 323
KC++C TGH A +C + ++ CYRC +GH
Sbjct: 13 KCYRCGETGHVAINCSKTSEVNCYRCGESGH 43
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEA 290
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 14 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 52
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECT 185
SK S CY+C +GH ARECT
Sbjct: 28 SKTSEVNCYRCGESGHLARECT 49
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARD-AGFNRQREK--CFKCNRTGHFARDC 278
M +C++C R GH REC + ARD G R C +C R H+ +C
Sbjct: 503 MRGRICFRCGREGHLMREC-RAKFPARDRQGIENSRRPGLCPRCRRGNHWVSEC 555
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 219 NRQREKCFKCNRTGHFARDCK 281
N + CF+C R GH R+C+
Sbjct: 502 NMRGRICFRCGREGHLMRECR 522
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYR 305
M + +CY+C T H +C + V F KCF C GH +R C + Y
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 306 CNG 314
G
Sbjct: 209 DGG 211
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-- 293
+K ++ VC+ C + GH +C + +D G C++C T H CK + D
Sbjct: 123 AKKNAMVCFHCRKPGHGIADC-PAALENQDMGTG----ICYRCGSTEHEITKCKAKVDPA 177
Query: 294 -------RCYRCNGTGH 323
+C+ C GH
Sbjct: 178 LGEFPFAKCFVCGEMGH 194
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +3
Query: 126 MSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYR 305
M + +CY+C T H +C + V F KCF C GH +R C + Y
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 306 CNG 314
G
Sbjct: 209 DGG 211
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Frame = +3
Query: 120 SKMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-- 293
+K ++ VC+ C + GH +C + +D G C++C T H CK + D
Sbjct: 123 AKKNAMVCFHCRKPGHGIADC-PAALENQDMGTG----ICYRCGSTEHEITKCKAKVDPA 177
Query: 294 -------RCYRCNGTGH 323
+C+ C GH
Sbjct: 178 LGEFPFAKCFVCGEMGH 194
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 216 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 323
+ Q + CFKC H + C + DRC+RC GH
Sbjct: 164 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGH 197
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 165 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 209
Query: 303 RCNGTGH 323
C GH
Sbjct: 210 LCGKRGH 216
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 216 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 323
+ Q + CFKC H + C + DRC+RC GH
Sbjct: 328 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGH 361
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 329 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 373
Query: 303 RCNGTGH 323
C GH
Sbjct: 374 LCGKRGH 380
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 216 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 323
+ Q + CFKC H + C + DRC+RC GH
Sbjct: 329 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGH 362
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 302
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 330 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 374
Query: 303 RCNGTGH 323
C GH
Sbjct: 375 LCGKRGH 381
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 TQGGVGARDAGFNRQREK--CFKCNRTGHFARDCKE 284
TQG VG+ + +++ C+ C TGH A+DCK+
Sbjct: 888 TQGLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQ 188
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVGARDAGFNRQR 230
CY C +GH+A++C Q + A G R R
Sbjct: 854 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 883
Score = 29.9 bits (64), Expect = 1.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEA 290
C+ C +GH+A+DCK+ +
Sbjct: 854 CYNCGVSGHYAQDCKQSS 871
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 TQGGVGARDAGFNRQREK--CFKCNRTGHFARDCKE 284
TQG VG+ + +++ C+ C TGH A+DCK+
Sbjct: 771 TQGLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 806
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQ 188
K + CY C TGH A++C Q
Sbjct: 785 KSGNLSCYNCGATGHRAQDCKQ 806
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVGARDAGFNRQR 230
CY C +GH+A++C Q + A G R R
Sbjct: 253 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 282
Score = 29.9 bits (64), Expect = 1.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEA 290
C+ C +GH+A+DCK+ +
Sbjct: 253 CYNCGVSGHYAQDCKQSS 270
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVGARDAGFNRQR 230
CY C +GH+A++C Q + A G R R
Sbjct: 810 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 839
Score = 29.9 bits (64), Expect = 1.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEA 290
C+ C +GH+A+DCK+ +
Sbjct: 810 CYNCGVSGHYAQDCKQSS 827
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 TQGGVGARDAGFNRQREK--CFKCNRTGHFARDCKE 284
TQG VG+ + +++ C+ C TGH A+DCK+
Sbjct: 888 TQGLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQ 188
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 183 TQGGVGARDAGFNRQREK--CFKCNRTGHFARDCKE 284
TQG VG+ + +++ C+ C TGH A+DCK+
Sbjct: 849 TQGLVGSSNGSSHKKSGNLSCYNCGATGHRAQDCKQ 884
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 123 KMSSSVCYKCNRTGHFARECTQ 188
K + CY C TGH A++C Q
Sbjct: 863 KSGNLSCYNCGATGHRAQDCKQ 884
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQG 191
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQG 191
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQG 191
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQG 191
CYKC GH+A CT+G
Sbjct: 219 CYKCGEKGHYANRCTKG 235
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQG 191
CYKC GH+A CT+G
Sbjct: 220 CYKCGEKGHYANRCTKG 236
>AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ34176 fis, clone FCBBF3016178. ).
Length = 212
Score = 32.7 bits (71), Expect = 0.26
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 204 RDAGFNRQREKCFKCNRTGHFARDCKE 284
R G N + KC+ C + GHF ++C++
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKECRQ 152
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQ 188
CY C + GHF +EC Q
Sbjct: 137 CYNCEKPGHFKKECRQ 152
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRT 257
S CY+C + GH+++EC G R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRTG-RVADFTEQYNEQYGAVRT 199
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRT 257
S CY+C + GH+++EC G R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRTG-RVADFTEQYNEQYGAVRT 199
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 241 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 285
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD 293
S CY+C +GH + C + +G R+ ++++K K + +E D
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPQKKKEKKKKKKAPEPEEEIEEVEESED 157
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 90 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 134
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 31.5 bits (68), Expect = 0.60
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 308
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYC 286
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD 293
S CY+C +GH + C + +G R+ ++++K K + +E D
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKKKKKAPEPEEEIEEVEESED 157
>AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ46608 fis, clone TKIDN2003396, weakly similar
to Homo sapiens paternally expressed 10 (PEG10). ).
Length = 310
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 222 RQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGH 323
++ + C C+++GHF RDC + R N T H
Sbjct: 275 QETQLCLYCSQSGHFTRDCLAKRSRAPATTNNTAH 309
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 369
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 236
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKK 138
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 135 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREK 236
S CY+C +GH + C + +G R+ ++++K
Sbjct: 105 SKCYECGESGHLSYACPKNMLGEREPPKKKEKKK 138
>AF284337-1|AAG14458.1| 221|Homo sapiens SEBOX protein.
Length = 221
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -1
Query: 294 GQPPPCSRAQSARSGCT*STSPAAG*SQRRG 202
GQPPP S S C S+ PA G S R+G
Sbjct: 141 GQPPPSSGTPQRTSVCRHSSCPAPGLSPRQG 171
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 141 CYKCNRTGHFAREC---TQGGVGARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>EF152355-1|ABN42510.1| 135|Homo sapiens B cell maturation antigen
transcript variant 4 protein.
Length = 135
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 324 CAPCHYICSNGQPP-PCSRAQSARSG 250
C PC CS+ PP C R +ARSG
Sbjct: 21 CIPCQLRCSSNTPPLTCQRYCNARSG 46
>AY684975-1|AAV92616.1| 135|Homo sapiens tumor necrosis factor
receptor superfamily member 17 protein.
Length = 135
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 324 CAPCHYICSNGQPP-PCSRAQSARSG 250
C PC CS+ PP C R +ARSG
Sbjct: 21 CIPCQLRCSSNTPPLTCQRYCNARSG 46
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +3
Query: 141 CYKCNRTGHFAREC-----TQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR 296
CY C + GH + C + A + C +C + H+A C+ + D+
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQNITIQATTTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGH 323
++C+ C H A++CK + +C+ C H
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISH 169
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGH 323
++C+ C H A++CK + +C+ C H
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISH 169
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGH 323
++C+ C H A++CK + +C+ C H
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISH 169
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/33 (27%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGH 323
++C+ C H A++CK + +C+ C H
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISH 169
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 SVCYKCNRTGHFAREC 182
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC094811-1|AAH94811.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 535 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 572
>BC071852-1|AAH71852.1| 602|Homo sapiens ADAMTSL4 protein protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 535 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 572
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 28.7 bits (61), Expect = 4.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADR 296
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 SVCYKCNRTGHFAREC 182
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC027478-1|AAH27478.1| 424|Homo sapiens ADAMTSL4 protein protein.
Length = 424
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 357 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 394
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 135 SVCYKCNRTGHFAREC 182
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 28.7 bits (61), Expect = 4.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADR 296
CF+C + GH+ ++C D+
Sbjct: 28 CFRCGKPGHYIKNCPTNGDK 47
>AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.
Length = 1074
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 1007 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 1044
>AL122085-1|CAB59258.1| 111|Homo sapiens hypothetical protein
protein.
Length = 111
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 44 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 81
>AF217974-1|AAG17217.1| 237|Homo sapiens unknown protein.
Length = 237
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -3
Query: 265 KCPVRLHLKHFSRCRLKPASRAPTPPCVHSRAKCPVLL 152
+CP +L C +P S+ P C S CP+++
Sbjct: 170 RCPPQLRPSRKRPCNSQPCSQRPDDQCKDSSPHCPLVV 207
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADR 296
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 28.7 bits (61), Expect = 4.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 237 CFKCNRTGHFARDCKEEADR 296
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domain
containing 10 protein.
Length = 170
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 195 VGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 317
+ R A N+Q +C KC GH+ +C + +R + T
Sbjct: 9 IARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRT 49
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>AK091425-1|BAC03661.1| 137|Homo sapiens protein ( Homo sapiens
cDNA FLJ34106 fis, clone FCBBF3008073, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 7. ).
Length = 137
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ20094 fis, clone COL04320. ).
Length = 170
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 195 VGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 317
+ R A N+Q +C KC GH+ +C + +R + T
Sbjct: 9 IARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRT 49
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 28.3 bits (60), Expect = 5.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 231 EKCFKCNRTGHFARDCKEEADR 296
++C++C GH+A DC + R
Sbjct: 104 DRCYECGEKGHYAYDCHRYSRR 125
>X55110-1|CAA38908.1| 143|Homo sapiens neurite outgrowth-promoting
protein protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 GVGARDA--GFNRQREKC-FKCNRTGHFARDCKEEADRCYRCNG 314
GVG R+ G QR +C CN F DCK + + C+G
Sbjct: 53 GVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDG 96
>M94250-1|AAA59850.1| 143|Homo sapiens retinoic acid inducible
factor protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 GVGARDA--GFNRQREKC-FKCNRTGHFARDCKEEADRCYRCNG 314
GVG R+ G QR +C CN F DCK + + C+G
Sbjct: 53 GVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDG 96
>M69148-1|AAA58478.1| 143|Homo sapiens midkine protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 GVGARDA--GFNRQREKC-FKCNRTGHFARDCKEEADRCYRCNG 314
GVG R+ G QR +C CN F DCK + + C+G
Sbjct: 53 GVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDG 96
>D10604-1|BAA01457.1| 143|Homo sapiens midkine protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 GVGARDA--GFNRQREKC-FKCNRTGHFARDCKEEADRCYRCNG 314
GVG R+ G QR +C CN F DCK + + C+G
Sbjct: 53 GVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDG 96
>BC039249-1|AAH39249.1| 301|Homo sapiens C10orf56 protein protein.
Length = 301
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Frame = +3
Query: 138 VCYKCNRTGHFARECTQGGVGARDAGFNRQREKCF------KCNRTGHFARDCKEEADRC 299
+C+ C GH+ ++C Q + +++CF KC R C
Sbjct: 193 LCHLCFNKGHYIKDCPQARTKGEGLTPYQGKKRCFGEYKCPKCKRKWMSGNSWANMGQEC 252
Query: 300 YRCN 311
+C+
Sbjct: 253 IKCH 256
>BC018612-1|AAH18612.1| 871|Homo sapiens zinc finger protein 473
protein.
Length = 871
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 147 KCNRTGHFARECTQGGVGARDAGFN-RQREKCFKCNR 254
KC+ + H ARE V + N Q+EKCFKCN+
Sbjct: 531 KCHESVH-AREKQGFFVSGKILDQNPEQKEKCFKCNK 566
>BC011704-1|AAH11704.1| 143|Homo sapiens midkine (neurite
growth-promoting factor 2) protein.
Length = 143
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 192 GVGARDA--GFNRQREKC-FKCNRTGHFARDCKEEADRCYRCNG 314
GVG R+ G QR +C CN F DCK + + C+G
Sbjct: 53 GVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDG 96
>AF454744-1|AAL51029.1| 871|Homo sapiens zinc finger protein ZFP100
protein.
Length = 871
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 147 KCNRTGHFARECTQGGVGARDAGFN-RQREKCFKCNR 254
KC+ + H ARE V + N Q+EKCFKCN+
Sbjct: 531 KCHESVH-AREKQGFFVSGKILDQNPEQKEKCFKCNK 566
>AB032967-1|BAA86455.1| 914|Homo sapiens KIAA1141 protein protein.
Length = 914
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 147 KCNRTGHFARECTQGGVGARDAGFN-RQREKCFKCNR 254
KC+ + H ARE V + N Q+EKCFKCN+
Sbjct: 574 KCHESVH-AREKQGFFVSGKILDQNPEQKEKCFKCNK 609
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 183 CTRGRSAPSCCTC 145
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>L19182-1|AAA16187.1| 277|Homo sapiens MAC25 protein.
Length = 277
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/60 (25%), Positives = 21/60 (35%)
Frame = -1
Query: 315 CHYICSNGQPPPCSRAQSARSGCT*STSPAAG*SQRRGRLRHLACTRGRSAPSCCTCSIR 136
C +C+ G+ PC + R C +RRG+ A G C C R
Sbjct: 59 CCPMCARGEGEPCGGGGAGRGYCAPGMECVKSRKRRRGKAG--AAAGGPGVSGVCVCKSR 116
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 183 CTRGRSAPSCCTC 145
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -1
Query: 321 APCHYICSNGQPPPCSRAQSARSGCT*STSPAAG*SQRRGRLRHLACTRGRSAPSC---C 151
A CH CS C A + C A +R G +L C RG+ PSC C
Sbjct: 1107 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1165
Query: 150 TC 145
C
Sbjct: 1166 DC 1167
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -1
Query: 321 APCHYICSNGQPPPCSRAQSARSGCT*STSPAAG*SQRRGRLRHLACTRGRSAPSC---C 151
A CH CS C A + C A +R G +L C RG+ PSC C
Sbjct: 1107 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1165
Query: 150 TC 145
C
Sbjct: 1166 DC 1167
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +3
Query: 141 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE 284
CY+C + GH+ C G G + C C + ++ +C E
Sbjct: 437 CYQCGKPGHWKANCPYGPRGEKPC------TACPLCRKLRYWKENCPE 478
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 183 CTRGRSAPSCCTC 145
CT GR APSC TC
Sbjct: 4365 CTDGRVAPSCLTC 4377
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 273 RAQSARSGCT*STSPAAG*SQRRGRLRHLACTRGRSAPSCCTC 145
R A S C S P A RR +L H+A + RS+P CTC
Sbjct: 259 RHTPASSSC--SPRPMARCISRRCQLPHIASLQARSSP--CTC 297
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 183 CTRGRSAPSCCTC 145
CT GR APSC TC
Sbjct: 2180 CTDGRVAPSCLTC 2192
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -1
Query: 321 APCHYICSNGQPPPCSRAQSARSGCT*STSPAAG*SQRRGRLRHLACTRGRSAPSC---C 151
A CH CS C A + C A +R G +L C RG+ PSC C
Sbjct: 1124 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1182
Query: 150 TC 145
C
Sbjct: 1183 DC 1184
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,100,979
Number of Sequences: 237096
Number of extensions: 732030
Number of successful extensions: 3216
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 2491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3018
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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