Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G20
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.49 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.49 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.49 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   3.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   4.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.1  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.0  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.0  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 144 LMSYRNWRTTVCNCPKPFRRSRNSLLRKARKLTSTLSVTTFAFSEQT 284
           ++   N  T + +CP  F     + L ++  LT+  S T F+F  +T
Sbjct: 8   VVEINNGETIIISCPGGFVMEDANNLTQSTILTTCESNTDFSFGSKT 54


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 234 KLTSTLSVTTFAFSEQTALPLTTHLTSLLNPMFWLLV 344
           KLT T  +  +AF  Q  L +T    S++  +F + +
Sbjct: 270 KLTDTAHMINYAFCVQQLLRITVAFISIVTALFLVAI 306


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 234 KLTSTLSVTTFAFSEQTALPLTTHLTSLLNPMFWLLV 344
           KLT T  +  +AF  Q  L +T    S++  +F + +
Sbjct: 270 KLTDTAHMINYAFCVQQLLRITVAFISIVTALFLVAI 306


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 216 LLRKARKLTSTLSVTTFAFSEQTALPLTTHLTSLLNPMFWLLVV 347
           L R   KLTS +     AFS Q  + +   L  +L   ++L  V
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 216 LLRKARKLTSTLSVTTFAFSEQTALPLTTHLTSLLNPMFWLLVV 347
           L R   KLTS +     AFS Q  + +   L  +L   ++L  V
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYYLYYV 276


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 128 VERTVADVLPELENNCMQLPKAVQALEEQL 217
           VERT ++++P L        + + AL EQL
Sbjct: 46  VERTRSELIPFLTETIYDEDEVLLALAEQL 75


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -3

Query: 116 PPCGSTFESPPPRAMSRSQFCA 51
           P C     SP P   S S F A
Sbjct: 194 PTCSEASSSPTPSHSSESSFSA 215


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 208 LERLNGFGQLHTVVLQF 158
           +E +NGF  +HT+++ F
Sbjct: 260 IEAINGFYGVHTLLILF 276


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 288 LPLTTHLTSLLNPMFWLLVVKLALFNYK 371
           LPL   LT+ L  +  + V +L +  YK
Sbjct: 281 LPLLCILTNTLEILITVTVCELTILEYK 308


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 288 LPLTTHLTSLLNPMFWLLVVKLALFNYK 371
           LPL   LT+ L  +  + V +L +  YK
Sbjct: 106 LPLLCILTNTLEILITVTVCELTILEYK 133


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 84  PLSTPSNSNATKSSGLTSPLSVST 107


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 192 PFRRSRNSLLRKARKLTSTLSVTT 263
           P     NS   K+  LTS LSV+T
Sbjct: 128 PLSTPSNSNATKSSGLTSPLSVST 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,968
Number of Sequences: 336
Number of extensions: 1979
Number of successful extensions: 24
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)