Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G20
         (493 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30825| Best HMM Match : No HMM Matches (HMM E-Value=.)              67   8e-12
SB_41191| Best HMM Match : PadR (HMM E-Value=8.6)                      34   0.073
SB_1646| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   0.90 
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)                  30   1.2  
SB_5255| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.2)                29   1.6  
SB_36148| Best HMM Match : Laminin_EGF (HMM E-Value=4.7)               28   3.6  
SB_36147| Best HMM Match : Keratin_B2 (HMM E-Value=1.7)                28   3.6  
SB_12346| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.8  
SB_37180| Best HMM Match : zf-AN1 (HMM E-Value=3.7)                    27   6.4  
SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)                   27   6.4  
SB_41278| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)                27   6.4  
SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20)           27   8.4  
SB_37181| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0)                      27   8.4  
SB_57510| Best HMM Match : Keratin_B2 (HMM E-Value=5.4)                27   8.4  
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_5726| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.4  

>SB_30825| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 270

 Score = 66.9 bits (156), Expect = 8e-12
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +2

Query: 38  MDLNEHKIVIETLRGVEGSRKCFRMVGGVLVERTVADVLP 157
           MD +EH IVIE L+ V+ SRKCFRM+GGVLVERTV DVLP
Sbjct: 230 MDQSEHSIVIEALKEVDASRKCFRMIGGVLVERTVGDVLP 269


>SB_41191| Best HMM Match : PadR (HMM E-Value=8.6)
          Length = 276

 Score = 33.9 bits (74), Expect = 0.073
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +2

Query: 14  SGAKYQSCMDLNEHKIVIETLRGVEGSRKCFRMVGGVLVERTVADVLPELENNCMQLPKA 193
           SG    S   L +H IV    RG++ ++  F +    ++++T       +E NC  L   
Sbjct: 95  SGTLLPSFTSLEKHNIVTPRQRGIQANK--FHLRSRYMIDQTFTQQSDSVEENCSPLR-- 150

Query: 194 VQALEEQLAKKGEEIN 241
            Q + E +  KG +IN
Sbjct: 151 -QKVREIVGSKGTQIN 165


>SB_1646| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 534

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 14  SGAKYQSCMDLNEHKIVIETLRGVEGSRKCFRMVGGVLVERTVADVLPELENNCMQLPKA 193
           SG    S   L +H IV    RG++ ++  F +    ++++T       +E NC  L + 
Sbjct: 304 SGTLLPSFTSLEKHNIVTPRQRGIQANK--FHLRSRYMIDQTFTQQSDSVEENCSPLRQK 361

Query: 194 VQAL 205
           V+ +
Sbjct: 362 VREI 365


>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
          Length = 813

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 19  SKISELHGSKRAQNCDRDIARGGGLSKVLPHGGRRTGRA 135
           SK+SELHG+   + CD+        + V   G +R+GRA
Sbjct: 267 SKLSELHGNMFVEKCDKCNKEYVRTTAVASVGQKRSGRA 305


>SB_5255| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.2)
          Length = 104

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 153 YRNWRTTVCNCPKP 194
           Y NW T  C+CPKP
Sbjct: 21  YYNWNTNQCDCPKP 34


>SB_36148| Best HMM Match : Laminin_EGF (HMM E-Value=4.7)
          Length = 540

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           F +A+SCRC S+H+L
Sbjct: 471 FPIAFSCRCVSHHVL 485



 Score = 28.3 bits (60), Expect = 3.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           FL+A SCRC  YH+L
Sbjct: 499 FLIACSCRCFPYHVL 513


>SB_36147| Best HMM Match : Keratin_B2 (HMM E-Value=1.7)
          Length = 533

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           F +A SCRC SYH+L
Sbjct: 280 FPIACSCRCVSYHVL 294



 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           FL+A SCRC  +H+L
Sbjct: 392 FLIACSCRCVPHHVL 406


>SB_12346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 207

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 141 TVRSTSTPPTMRKHFREPST---PRNVSIT 61
           +V +  TPP   +H REPST   PR V+ T
Sbjct: 147 SVGTPDTPPITSRHSREPSTRLAPRGVATT 176


>SB_37180| Best HMM Match : zf-AN1 (HMM E-Value=3.7)
          Length = 519

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHILHKHLE*RRQLTFQFVI 363
           F +A SCRC S+H+L       R   + F I
Sbjct: 14  FFIAGSCRCVSHHVLMSMCSTSRAHVYVFYI 44


>SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)
          Length = 304

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 177 IQLFSSSGRTSATVRSTSTPPTMRKHFREPSTPRNVSIT 61
           + L   S   S T R  STPP+ RKH R     R+ S T
Sbjct: 108 LSLEKESCNKSFTPRPPSTPPSPRKHSRPCRPTRSQSST 146


>SB_41278| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 138 P*LMSYRNWRTTVCNCPKPFRRSRNSLLRKARKLTSTL 251
           P  +SY   RTTV  C K   +SRNS+ R+    T T+
Sbjct: 38  PTTLSYCILRTTVPLCVKHQCQSRNSMRRRCNPSTVTM 75


>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2323

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 189  KPFRRSRNSLLRKARKLTSTLSVTTFAFSEQTAL 290
            +PFRR+R  +   A+K      ++TF  S+++A+
Sbjct: 2098 QPFRRNRPQIGANAKKTQGVYDLSTFGVSDRSAV 2131


>SB_44172| Best HMM Match : Pkinase_Tyr (HMM E-Value=6.3e-20)
          Length = 637

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = -3

Query: 200 PERLWAIAYSCSPVPVGHQLRCA---LPVRRPPCGSTFESPPPRAMSRSQFCARLDPCNS 30
           P+R+  +      +PVG  +      L V RP C ST + P   +  R  F  R  P N+
Sbjct: 363 PDRMLKVILLTIILPVGLAILIVALFLAVFRPRC-STADKPLQPSPMRQIFGPRDGPANN 421

Query: 29  DILLPICL 6
           + L   CL
Sbjct: 422 ETLYAACL 429


>SB_37181| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 214

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           F +A SCRC S+H+L
Sbjct: 42  FFIAGSCRCVSHHVL 56


>SB_57511| Best HMM Match : EGF_CA (HMM E-Value=0)
          Length = 879

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           FL+A SCRC  +H+L
Sbjct: 70  FLIACSCRCVPHHVL 84


>SB_57510| Best HMM Match : Keratin_B2 (HMM E-Value=5.4)
          Length = 198

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 455 FLLAYSCRCTSYHIL 411
           F +A SCRC S+H+L
Sbjct: 110 FFIAGSCRCVSHHVL 124


>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1267

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 180 NCPKPFRRSRNSLLRKARKLTSTLSVTTFAFSEQTALPLTTHLTS 314
           NCP   + S  S  R  R L   +S +T     ++++P T H  S
Sbjct: 92  NCPVSMKTSGQSSPRLTRHLARPMSPSTTKIFARSSVPFTGHHVS 136


>SB_5726| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 61  CDRDIARGGGLSKVLPHGGRRTGRAHRS*CPTGTGEQLYAIAQSRSGARGTA 216
           CD ++A  G LS +  H G R        C +  G   Y ++ +R+    TA
Sbjct: 41  CDYNLAGAGDLSTIW-HDGSRDWSTEEKDCLSYNGIPYYTMSDARNDVTSTA 91


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,822,174
Number of Sequences: 59808
Number of extensions: 272989
Number of successful extensions: 886
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1050596726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)