Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G19
(419 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 36 0.003
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 34 0.010
SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr ... 33 0.018
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 31 0.073
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 30 0.17
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 29 0.29
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 29 0.39
SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|... 27 1.2
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 27 1.6
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 26 2.1
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 2.7
SPBP23A10.14c |ell1||RNA polymerase II transcription elongation ... 26 2.7
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 2.7
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 25 3.6
SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual 25 3.6
SPCC1259.11c |gyp2||GTPase activating protein Gyp2 |Schizosaccha... 25 4.8
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 25 4.8
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 6.3
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 25 6.3
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo... 25 6.3
SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyce... 24 8.4
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa... 24 8.4
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 24 8.4
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 35.9 bits (79), Expect = 0.003
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 156 RTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGFNLV-SVDASD 302
RT+ Y+DF+ K VLD CGTGI SM G V +VD SD
Sbjct: 239 RTEGYRDFVYHNKHIFAGKTVLDVGCGTGILSMFCAKAGAKKVYAVDNSD 288
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 33.9 bits (74), Expect = 0.010
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 174 DFLIGLLKKHGC---KKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALK 326
DF+ + ++ C KK+LD CG GI S + G ++ +VDAS ++ A K
Sbjct: 64 DFMTEVFRERNCFSGKKILDIGCGGGILSESMARLGASVTAVDASPMAIEVAKK 117
>SPAC26A3.06 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 268
Score = 33.1 bits (72), Expect = 0.018
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 189 LLKKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKAR 332
LL G +LD CG+GI + + +G +V +D S ML AL+++
Sbjct: 42 LLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQ 89
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 31.1 bits (67), Expect = 0.073
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 90 KDQYADGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDE 269
KD Y D + ++ + + RT +Y+D ++ K VLD CGTGI SM
Sbjct: 16 KDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSMFCARA 75
Query: 270 GF-NLVSVDASD 302
G ++ VD S+
Sbjct: 76 GAKHVYGVDMSE 87
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 29.9 bits (64), Expect = 0.17
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 195 KKHGCKKVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPK 356
KK G +LD ACGTG+ S L +V +D S M+ ++ K PK
Sbjct: 75 KKSGMS-ILDFACGTGLISQHLFPYCKQIVGIDVSQDMV-DVYNEKFRKMNIPK 126
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 29.1 bits (62), Expect = 0.29
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 213 KVLDGACGTGIDSMMLVDEGFNLVSVDASDKMLKHA 320
++LD CG G+ + LV + +V +DAS M+K A
Sbjct: 36 ELLDLGCGDGVLTNELVSQCRRVVGIDASPDMIKAA 71
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 28.7 bits (61), Expect = 0.39
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 210 KKVLDGACGTGIDSMMLVDEGFNL-VSVDASDKMLKHALKARWEKRKNPKYDEWVIEEAN 386
++VL+ G GI L ++ +L V ++ +LKH K W R+N ++ E
Sbjct: 187 RRVLNVGFGLGIIDTFLQEKEPSLHVIIEPHPDVLKHMRKNGWMDRENV-----IVYETT 241
Query: 387 WETLPRDI 410
WE DI
Sbjct: 242 WENAINDI 249
>SPAC328.01c ||SPAC3A11.01|karyopherin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1234
Score = 27.1 bits (57), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 343 LFSHLALSACFNILSEASTETRLKPSSTSIMESIP 239
L SH+ +A +ILS +ST +L PS +IP
Sbjct: 179 LRSHILFNALISILSSSSTLHKLYPSGLPYSVTIP 213
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 26.6 bits (56), Expect = 1.6
Identities = 11/15 (73%), Positives = 14/15 (93%), Gaps = 1/15 (6%)
Frame = +3
Query: 369 VIEEA-NWETLPRDI 410
VI++A NWETLPRD+
Sbjct: 567 VIDKADNWETLPRDV 581
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 159 FFHYCLQ*ICSTLELPYRLHTDPLHPLKVY 70
FF++ L + TL+ Y H+D +HP V+
Sbjct: 202 FFNFLLNSVTETLDEYYGNHSDVMHPKWVH 231
>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 2.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 298 EASTETRLKPSSTSIMESIPVPQA 227
++STE ++ P T I+ IPVP +
Sbjct: 215 KSSTELKIPPVETRIVAEIPVPSS 238
>SPBP23A10.14c |ell1||RNA polymerase II transcription elongation
factor SpELL|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 2.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 67 KVYLQRV*RISMQTVRQLERGTNSLETVMKEHKIIKTSSSGF*KNTDARKCWTVLAEQGL 246
K+ L+R + T +++ T + +E +I+ + G KNT ARK L + GL
Sbjct: 95 KLQLRR--ELDSLTAERVKNRTQEAQKEKEEKRIVTLQNDGGSKNTTARK-QKQLKKNGL 151
Query: 247 TP 252
P
Sbjct: 152 RP 153
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 25.8 bits (54), Expect = 2.7
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = -1
Query: 389 PISLF-----DYPFIIFWVFPLLPPGFERVLQHFVRSVN*NKIETFVYQHHGVNPCSAST 225
PIS+F YP I W+ P++ F V V+ N I YQH + +A+T
Sbjct: 427 PISMFWFAWTCYPHHIHWIVPIIASAFFGFSLLIVFFVSYNYI-IDSYQHMAPSALAAAT 485
Query: 224 VQHFLAS 204
+ + AS
Sbjct: 486 LVRYSAS 492
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 3.6
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 243 IDSMMLVDEGFNLVSVDASDKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENF 419
+D+M L D F +S D + +L+ L EKR K E V+ W T ++E+F
Sbjct: 233 LDAMTLFDV-FPTLSQDTYN-VLRACLCVSPEKRSLAKTREAVLAVTKWTTDDEELESF 289
>SPAPB2B4.01c |gpi12||pig-L|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 25.4 bits (53), Expect = 3.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 297 SDKMLKHALKARWEKRKNPKYDEWVIEEANWETL 398
SD L+ ++A+W+ K+ +IE N +TL
Sbjct: 102 SDPQLQDGMQAKWDPTDVAKHISQIIERYNIKTL 135
>SPCC1259.11c |gyp2||GTPase activating protein Gyp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 720
Score = 25.0 bits (52), Expect = 4.8
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 394 VSQLASSITHSSYFGFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIPVPQAPSST 215
V QL +S+ +S G FL S + CF SE++ ++ + P A S+T
Sbjct: 122 VRQLHASLEDASSVGLFLLSLASERVCF---SESANSQEIESIDLGLGSQFGYPIASSNT 178
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.0 bits (52), Expect = 4.8
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -3
Query: 180 GSLYNFVFFHYCLQ*ICSTLELPYRLHTDPLHPLKVYLQISNEKLDPQTL 31
GS Y + + L+ C P +HTDP + + K++PQ +
Sbjct: 54 GSYYTTKIWSFSLK--CHLCSNPIDVHTDPKNTEYIVASGGRRKIEPQDI 101
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 6.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 352 GFFLFSHLALSACFNILSEASTETRLKPSSTSIMESIP 239
GFFL A ++LS + + ++KP T + +P
Sbjct: 165 GFFLGGASAGGNFVSVLSHIARDEKIKPELTGLWHMVP 202
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 24.6 bits (51), Expect = 6.3
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 105 DGKAARAWNKFIGDSNERTQNYKDFLIGLLKKHGCKKVLDGACGTGIDSMMLVDEGF 275
+ +A RA + S E K+FL+G++ +H K D +C ++ ++ +D+G+
Sbjct: 467 EAEALRADLETCKCSEEDEAGLKEFLLGVIDRH--LKEYD-SCRVRMEHVLQLDQGY 520
>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 325
Score = 24.6 bits (51), Expect = 6.3
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 69 GIPSEGVKDQYADGKAARAWNKFIGDSNERTQNYK 173
GI S G Y+D K WN F + N + K
Sbjct: 288 GISSSGRAAGYSDEKKQNLWNLFAEEVNRHREIVK 322
>SPAC1B3.06c |||UbiE family methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 24.2 bits (50), Expect = 8.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 45 QVFHSRSEGIPSEGVKDQYADGKAARAWNKFIGDS 149
+V HS +E + + KDQ + A AW ++ DS
Sbjct: 228 RVLHS-NERLDDDDAKDQSLRKRVAEAWQRWKEDS 261
>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
Msa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 24.2 bits (50), Expect = 8.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 304 LSEASTETR-LKPSSTSIMESIPVPQAPSSTFLHP 203
LSE T +KP + S P+P + SS L+P
Sbjct: 36 LSENDNSTTFIKPPLETASSSTPIPSSSSSGVLNP 70
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 24.2 bits (50), Expect = 8.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 10 RIASQIE*CLRIKFFIRDLKVYLQRV*RISMQT 108
R + E CL +K+ +DL++ ++ S+QT
Sbjct: 1287 RFSKATEQCLMVKYIKKDLEIEIEESCDFSIQT 1319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,818,614
Number of Sequences: 5004
Number of extensions: 38003
Number of successful extensions: 154
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 148351622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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