Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G18
         (512 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              49   2e-08
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 49.2 bits (112), Expect = 2e-08
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +3

Query: 183 DPCMKVHCSAGRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 359
           DPC   +C  G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -3

Query: 372 GRG---RGSAVGTPRSPMTRSR*SL 307
           GRG    GS  G+PRSP + SR S+
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSRCSV 334


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 38  RGHLRVGAPRERHGGEPGRETI 103
           +G    G P +R+GGE  ++ +
Sbjct: 532 KGAAAAGQPSKRNGGETNKQEL 553


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = +3

Query: 57  EHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINL 179
           E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 830 EILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINM 870



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 226 RSTSTGKLSATASRSVHTKPTLGAR 300
           R T   +LSAT  R V T+P    R
Sbjct: 186 RLTGETRLSATKGRLVITEPVGSVR 210


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 36  RGDISESEHLENGMAESLDERRFQEAERA 122
           R D  E+E  E+G  +S  E+R +  E A
Sbjct: 280 RDDDEENEEEEDGRGQSEAEKRLKLDEDA 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,240
Number of Sequences: 438
Number of extensions: 3603
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)