Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G14
         (541 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    26   0.70 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   2.8  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   8.7  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.7  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -3

Query: 89  RPEPPCRRGPRARSYPRAHQAWAWLASRP 3
           R  PP RR PR RS PR+   W    S P
Sbjct: 248 RKIPPSRRNPRRRS-PRSGGRWPSCRSPP 275



 Score = 24.6 bits (51), Expect = 2.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 119 DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAWLASRP 3
           +PR RR  R+    P  R P AR   R+ +  +W  SRP
Sbjct: 256 NPR-RRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRP 293


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 107 RRGLRARPEPPCRRGPRARS 48
           R  LR    PPC RGP  RS
Sbjct: 34  RNTLRQMRWPPCYRGPDMRS 53


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 410 GTSVPRASLLSPRRGRLIPFHIINLRE 490
           G S+P+ +LLS   G +  F+ I L+E
Sbjct: 350 GDSIPQRALLSCAFGAVFIFNYIPLQE 376


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 396 RLSHRARASLAQVSSRRAGGASFH 467
           R +HR   ++    SR+ G  SFH
Sbjct: 892 RWAHRVLPNIGSWQSRKHGDVSFH 915


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,297
Number of Sequences: 2352
Number of extensions: 4123
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)