Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G14
(541 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor, arginine... 35 0.21
L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor ... 35 0.21
BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor, argini... 35 0.21
BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor, argini... 35 0.21
BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor, argini... 35 0.21
AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing facto... 35 0.21
AK127421-1|BAC86972.1| 130|Homo sapiens protein ( Homo sapiens ... 33 0.64
D88153-1|BAA21667.1| 340|Homo sapiens HYA22 protein. 33 0.84
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 32 1.5
BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein. 31 2.6
AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32 pro... 31 2.6
AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific prot... 31 2.6
BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repea... 30 6.0
AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein. 30 6.0
AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein. 30 6.0
BC089443-1|AAH89443.1| 302|Homo sapiens family with sequence si... 29 7.9
BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog (m... 29 7.9
BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for IM... 29 7.9
BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for IM... 29 7.9
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 29 7.9
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 29 7.9
AL162741-13|CAI23256.2| 302|Homo sapiens novel protein protein. 29 7.9
AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein. 29 7.9
>Z85986-1|CAI19115.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>L10838-1|AAA36648.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BT007017-1|AAP35663.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BC069018-1|AAH69018.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>BC000914-1|AAH00914.1| 164|Homo sapiens splicing factor,
arginine/serine-rich 3 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>AF107405-1|AAD44523.1| 164|Homo sapiens pre-mRNA splicing factor
protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.21
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -3
Query: 158 RTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRA 36
R+RNR P P+ R R R R PP RR PR RS+ R+
Sbjct: 86 RSRNRGPP--PSWGRRPRDDYRRRSPPPRRRSPRRRSFSRS 124
>AK127421-1|BAC86972.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45513 fis, clone BRTHA2021450. ).
Length = 130
Score = 33.1 bits (72), Expect = 0.64
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3
Query: 173 HSLPARTRNRRSP---GCPTADPRSRRGLRARPEPPCRR-GPRARSYPRAHQAWAWLASR 6
H+LP + R P CP D SR + R P R GP+A++ P + +W W S
Sbjct: 38 HTLPGSDKPERKPTMQDCP-CDGSSRGSISKRLRGPHRGPGPQAKATPVSLPSWEWEESG 96
Query: 5 P 3
P
Sbjct: 97 P 97
>D88153-1|BAA21667.1| 340|Homo sapiens HYA22 protein.
Length = 340
Score = 32.7 bits (71), Expect = 0.84
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 143 RSPGCPTADPRSRRGLRARPEPPCRRGPRAR-SYPRAHQAWAWLA 12
R PG P P G RARP C R P R PRA AWLA
Sbjct: 20 RGPGPPL--PERGAGRRARPGSGCERPPAPRPRAPRAAPPRAWLA 62
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 31.9 bits (69), Expect = 1.5
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -3
Query: 170 SLPARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPR----ARSYPR 39
+LPA R+ P A PR RR P P RRGPR AR PR
Sbjct: 1011 TLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPR 1058
>BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein.
Length = 308
Score = 31.1 bits (67), Expect = 2.6
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Frame = -3
Query: 170 SLPARTRNRRSPGCPTADP----------RSRRGLRARPEPPCR-RGPRARSYPRAHQAW 24
S+P R + SP CP P RS+ GL A P PP R P P A +
Sbjct: 86 SIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPR 145
Query: 23 AWLASR 6
AW SR
Sbjct: 146 AWRGSR 151
>AL138752-6|CAI13878.1| 559|Homo sapiens WD repeat domain 32
protein.
Length = 559
Score = 31.1 bits (67), Expect = 2.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 137 PGCPTADPRSRRGLRARPEPPCRR-GPRARSYPR 39
PG P + S G + P PPCRR GP R+ R
Sbjct: 74 PGAPESSTASAPGEPSPPSPPCRRPGPDCRAKSR 107
>AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific
proteinase 51 protein.
Length = 711
Score = 31.1 bits (67), Expect = 2.6
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Frame = -3
Query: 170 SLPARTRNRRSPGCPTADP----------RSRRGLRARPEPPCR-RGPRARSYPRAHQAW 24
S+P R + SP CP P RS+ GL A P PP R P P A +
Sbjct: 86 SIPLRCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPR 145
Query: 23 AWLASR 6
AW SR
Sbjct: 146 AWRGSR 151
>BC014164-1|AAH14164.2| 735|Homo sapiens tetratricopeptide repeat
domain 15 protein.
Length = 735
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 140 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 21
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 242 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 281
>AK094181-1|BAC04301.1| 696|Homo sapiens (EC 3.1.4.17). protein.
Length = 696
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 140 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 21
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 225 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 264
>AC073502-2|AAY24194.1| 349|Homo sapiens unknown protein.
Length = 349
Score = 29.9 bits (64), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 140 SPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWA 21
SP + P + G RPEP RGP+A + P + + +A
Sbjct: 242 SPAPASPPPLAVPGTEGRPEPVAMRGPQAAAPPASPEPFA 281
>BC089443-1|AAH89443.1| 302|Homo sapiens family with sequence
similarity 132, member A protein.
Length = 302
Score = 29.5 bits (63), Expect = 7.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 146 RRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAWLASRP 3
R P TA SR GL P+P GP + AH W RP
Sbjct: 38 RADPPNATASASSREGLPEAPKPSQASGP---EFSDAHMTWLNFVRRP 82
>BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog
(mouse) protein.
Length = 690
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 164 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 18
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for
IMAGE:3944479) protein.
Length = 621
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 164 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 18
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for
IMAGE:3160482) protein.
Length = 607
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 164 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 18
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 197 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 247
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 161 ARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPR 39
+RTR+R SP R R R RP P R PR R+ PR
Sbjct: 286 SRTRSR-SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPR 325
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.5 bits (63), Expect = 7.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 161 ARTRNRRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPR 39
+RTR+R SP R R R RP P R PR R+ PR
Sbjct: 286 SRTRSR-SPSHTRPRRRHRSRSRRRPSPRRRPSPRRRTPPR 325
>AL162741-13|CAI23256.2| 302|Homo sapiens novel protein protein.
Length = 302
Score = 29.5 bits (63), Expect = 7.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 146 RRSPGCPTADPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAWLASRP 3
R P TA SR GL P+P GP + AH W RP
Sbjct: 38 RADPPNATASASSREGLPEAPKPSQASGP---EFSDAHMTWLNFVRRP 82
>AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein.
Length = 697
Score = 29.5 bits (63), Expect = 7.9
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = -3
Query: 164 PAR--TRNRRSPGCPTA-DPRSRRGLRARPEPPCRRGPRARSYPRAHQAWAW 18
PAR + +RR PG T DP S G R PP RR AR + + +W
Sbjct: 204 PARGDSEDRRGPGQKTGPDPASAPG-RGNYGPPVRRASEARMSSSSRDSESW 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,387,165
Number of Sequences: 237096
Number of extensions: 694726
Number of successful extensions: 2834
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2825
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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