Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G12
         (496 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical pr...    42   2e-04
AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical...    29   1.4  
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81068-6|CAB02986.1|  725|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z74031-14|CAD66220.1|  187|Caenorhabditis elegans Hypothetical p...    27   9.9  

>Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical
           protein C45G3.3 protein.
          Length = 289

 Score = 41.9 bits (94), Expect = 2e-04
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
 Frame = +1

Query: 1   YHHCTLLVNANKADLSKALA-----KRETHATASTRS-EVANLTDLDNRVTVESLQTALG 162
           YHH TLLV A+   LSK+L      K E++AT S R+  V  L   D    VE  + A+ 
Sbjct: 155 YHHLTLLVGADLQVLSKSLKSPWRDKIESNATRSVRAPAVGFLKQDDANANVEQSKLAIV 214

Query: 163 YEYLRTPALHLDHGGQNLISKQRGFQFVNPTDDWFPG--LADLKNELQSWDWCYGKTPIF 336
             Y +             + ++   + VN  ++      ++ + +EL++W W YGK+P F
Sbjct: 215 EAYRK-------------LFEESHIKTVNVAEEVKKNAEISKIFDELKAWKWIYGKSPKF 261

Query: 337 TVSR 348
             SR
Sbjct: 262 QYSR 265


>AF067609-11|AAC17532.2|  252|Caenorhabditis elegans Hypothetical
           protein C23H5.1 protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 118 LDNRVTVESLQTALGYEYLRTPALHLDHGGQNLISKQRGFQFVNPTDD 261
           L +R   E    A G+  +   A H     +NL+ +Q  FQF+NP  D
Sbjct: 197 LHSREFYEQCFKAAGFSQIEWIAPHFTDHAKNLLGEQFCFQFLNPPCD 244


>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
            protein Y75B7AL.4a protein.
          Length = 1126

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 34   KADLSKALAKRETHATASTRSEVANLTDLDNRVTVESLQTAL 159
            K  +S  LA++ TH++ ST   V N  +L    +++   TAL
Sbjct: 926  KKKVSPLLARQATHSSKSTTLSVPNRANLRETKSIDETPTAL 967


>Z70287-6|CAH04747.1|  443|Caenorhabditis elegans Hypothetical
           protein R09E10.9 protein.
          Length = 443

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 319 GKTPIFTVSRTFPVPAEILAPSKVY-SATQELVITMTVEKGLINDV 453
           G +P      T PVP+ I +PSKV  +  Q+ +IT TV   +I  V
Sbjct: 335 GVSPSPVPVSTPPVPSTIPSPSKVVPNPPQKSLITPTVPPSMIQTV 380


>Z81068-6|CAB02986.1|  725|Caenorhabditis elegans Hypothetical
           protein F25H5.5 protein.
          Length = 725

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -1

Query: 178 CGGTRSLAQFVGFPQSLDYPSRSDSPPRTASMPSRESHV 62
           C G+  ++Q  GFP +L      D+  R  ++P   + V
Sbjct: 265 CPGSFGVSQSAGFPDTLQMLIEEDTTERKINLPQNSTSV 303


>Z74031-14|CAD66220.1|  187|Caenorhabditis elegans Hypothetical
           protein F32D8.13 protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = +1

Query: 91  RSEVANLTDLDNRVTVESLQTALGYEYL----RTPALHLDHGGQNLISKQRGFQFVNPTD 258
           R+ +++  D D  V +   +    YEY     RT  + ++   ++   KQRG+QFV   D
Sbjct: 88  RAAISSTMDSDI-VIISDCRRRTDYEYFSANYRTVTIRIETSEED--RKQRGYQFVEGVD 144

Query: 259 D 261
           D
Sbjct: 145 D 145


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,251,142
Number of Sequences: 27780
Number of extensions: 238225
Number of successful extensions: 721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)