Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G11
(644 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 237 4e-63
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 203 1e-52
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 107 6e-24
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 64 1e-10
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_7694| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-28) 31 0.61
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 31 0.80
SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18) 31 0.80
SB_48670| Best HMM Match : AT_hook (HMM E-Value=3) 30 1.4
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 30 1.9
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 30 1.9
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 29 3.2
SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_34108| Best HMM Match : DUF714 (HMM E-Value=0.0053) 29 4.3
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 4.3
SB_58186| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_32866| Best HMM Match : Occludin_ELL (HMM E-Value=0.25) 28 5.7
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 28 7.5
SB_53072| Best HMM Match : K_tetra (HMM E-Value=8.2e-31) 27 9.9
SB_51284| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 237 bits (581), Expect = 4e-63
Identities = 109/188 (57%), Positives = 141/188 (75%)
Frame = +2
Query: 53 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEG 232
L+NG ++PV+G+GTWKSKPG+V AVK AI GYRHIDCA+ Y NEKEVG+A++ ++
Sbjct: 6 LNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELLGS 64
Query: 233 VVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTD 412
VV+R+DLFITSKLWNT H P VR SL++L +DYLDLYLIHWP ++++ D FP D
Sbjct: 65 VVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFPKD 124
Query: 413 ADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECH 592
G + ++ D DTWKA+E LV GLV+++G+SNFNSKQ+ I A +KPV NQVECH
Sbjct: 125 EQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECH 184
Query: 593 PYLNQKRL 616
P LNQ +L
Sbjct: 185 PLLNQAKL 192
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 203 bits (495), Expect = 1e-52
Identities = 93/182 (51%), Positives = 131/182 (71%)
Frame = +2
Query: 92 TWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKL 271
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA+ + EG VKRE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 272 WNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYV 451
W H PD V A + +L+NL +DYLDLYLIH P A+K+ + + A+G I ++
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 452 DTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECHPYLNQKRLKQFCE 631
+TW+A+E LV GL +++GVSNF+ K+L ++L+ AS+ P NQVE HPYL Q++LK+FC+
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCD 238
Query: 632 DR 637
+
Sbjct: 239 SK 240
Score = 54.8 bits (126), Expect = 6e-08
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Frame = +2
Query: 92 TWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKL 271
TW S G+V AV+ A ++GYR IDCA ++GNE GEA+ + +G VKRE+ T
Sbjct: 6 TWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREECGST--- 59
Query: 272 WNTFHRP--DLVRGALEVSLRNLNIDYLDLY 358
W + + VR A+E+ R +ID ++Y
Sbjct: 60 WQSSKEEVGNAVRLAIELGYR--HIDCAEIY 88
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 107 bits (258), Expect = 6e-24
Identities = 68/197 (34%), Positives = 104/197 (52%)
Frame = +2
Query: 53 LSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEG 232
+++G KIP++G+G QAV A++ GYR ID A Y NE+ VGEA++
Sbjct: 70 MNDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN--- 123
Query: 233 VVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTD 412
+ R ++++ +K++ T H A SL L + Y+DLYLIH+P P+
Sbjct: 124 -IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFP---------VPSG 173
Query: 413 ADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVECH 592
G +W+A+ L GL+RS+GVSNFN + L+ + V P NQ+E H
Sbjct: 174 VVG-----------SWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVH 222
Query: 593 PYLNQKRLKQFCEDRDI 643
P+L K L Q+C+ +I
Sbjct: 223 PFLQMKELTQYCKRHNI 239
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 99 bits (238), Expect = 2e-21
Identities = 71/199 (35%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Frame = +2
Query: 53 LSNGAKIPVIGIGTWKSKPGEVT-QAVKDAIDIGYRHIDCAFVYG-NEKEVGEAIKTKIQ 226
L++G +PV+G GT + GE T VK A++ GYR ID A Y +E +V +AI
Sbjct: 331 LASGYTMPVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA---- 384
Query: 227 EGVVKREDLFITSKLWNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFP 406
+ + R+D+FI +KL + + ++E+SLR L+ DY+DL+LIH K D
Sbjct: 385 DSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLL 440
Query: 407 TDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVE 586
T A+G+ + + + ++WKA+E L G +RSLGVSNFN +LQ +++ A+V Q
Sbjct: 441 TCAEGEPRGT---WKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNW 497
Query: 587 CHPYLNQKRLKQFCEDRDI 643
P+ ++ ++FC I
Sbjct: 498 FDPFHQDRKARRFCNKHGI 516
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 80.2 bits (189), Expect = 1e-15
Identities = 54/169 (31%), Positives = 86/169 (50%)
Frame = +2
Query: 137 AIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKLWNTFHRPDLVRGALE 316
A+ GYR +D A +Y NEKEVG A++ + +KRED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR----KSGLKREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 317 VSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLV 496
S++ L+I Y+DL+LIH P+ G I + + AL L GL+
Sbjct: 109 ESIKKLDIGYVDLFLIHTPR-------------PGNI-------IAAYDALLTLKEEGLI 148
Query: 497 RSLGVSNFNSKQLQRILDNASVKPVTNQVECHPYLNQKRLKQFCEDRDI 643
RS+GVSNF L+ + P NQ+E +P+ Q+ + ++C I
Sbjct: 149 RSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGI 197
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/95 (38%), Positives = 54/95 (56%)
Frame = +2
Query: 50 TLSNGAKIPVIGIGTWKSKPGEVTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQE 229
TLS+G KIP G+G + QAV A++ GYR ID A Y NEK VGEA++ E
Sbjct: 2 TLSDGYKIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEALR----E 57
Query: 230 GVVKREDLFITSKLWNTFHRPDLVRGALEVSLRNL 334
V R ++++ +K+++T H + A + SL L
Sbjct: 58 SAVPRSEVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 37.5 bits (83), Expect = 0.009
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +2
Query: 296 LVRGALEVSLRNLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEP 475
+V +++ S++ + +D LD+ HW +SD Y+D L
Sbjct: 5 VVEASIQKSMKRMAVDKLDMVQFHW------------------WDYSDKRYLDALLHLSE 46
Query: 476 LVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQVE---CHPYLNQKRLKQFCEDRDI 643
L G ++ + ++NF++ ++Q I D+ +K +NQ++ N+K +K FC D I
Sbjct: 47 LQSEGKIQEISLTNFDTNRMQEITDH-GIKISSNQIQFSLIDRRANEKMVK-FCLDHGI 103
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 116 VTQAVKDAIDIGYRHIDCAFVYGNEKEVGEAIKTKIQEGVVKREDLFITSKLWNTFHRPD 295
V + + + I Y + C V+G + I+T +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 296 LVRGALEVSL-RNL-NIDYLDLYLIHWPQAYKEDDAIFPTDADGKI 427
R ++ +L + L ++D+ DL L+ Q ++ D K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_7694| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-28)
Length = 329
Score = 31.5 bits (68), Expect = 0.61
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 229 LLNLSLYSLTHFLLVSIDKCAVYVSISDVYGIL 131
+L + Y++T +++ I KCA++ S VYG++
Sbjct: 167 VLGMDTYNVTFCVVMGICKCAIFTSYIQVYGVI 199
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 314 EVSLRNLNIDYLDLYLIHW 370
E SL L ID +DLYL+HW
Sbjct: 49 EKSLERLGIDRIDLYLLHW 67
>SB_20073| Best HMM Match : F5_F8_type_C (HMM E-Value=2.9e-18)
Length = 593
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1
Query: 431 TGSYRPHPLGRSHRLLCKPGASGSDRD 351
TG YRP P+G+ RL GASG+ RD
Sbjct: 123 TGPYRPDPIGKCDRLQ-SDGASGNIRD 148
>SB_48670| Best HMM Match : AT_hook (HMM E-Value=3)
Length = 207
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 404 PTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRILDNASVKPVTNQV 583
P + K + SD+ +V T ++P+ LV +LGV KQ + D A + V+N
Sbjct: 142 PNTKEAKARESDIHFVVTLTVVQPVDTEALVMALGVP---LKQKLSVTDRALLFRVSNHA 198
Query: 584 E 586
E
Sbjct: 199 E 199
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 464 ALEPLVCHGLVRSLGVSNFNSKQLQRILD 550
A E + C G++RSL + N ++Q+QR D
Sbjct: 104 ASEEIKCRGVIRSLRIENKQAEQVQRATD 132
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = -3
Query: 531 CFELKFETPRLRTSPWHTRGSRAFHVST*STSENWIL 421
C++L+F+ P TS H RG+R ++T T ++W++
Sbjct: 1169 CWDLRFQLPI--TSLSHPRGARIRRLATHPTEQSWVV 1203
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/68 (20%), Positives = 30/68 (44%)
Frame = +2
Query: 368 WPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLGVSNFNSKQLQRIL 547
W + E ++FP + Y TW++L+P + + + + + SK +RI
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 548 DNASVKPV 571
++ K +
Sbjct: 129 PDSEAKQI 136
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 329 NLNIDYLDLYLIHWPQAYKEDDAIFPTDADGKIQFSDVDYVDTWKALEPLVCHGLVRSLG 508
NL +D+L LI + KE +A G++ D WKA+EP V + +
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 509 VSNFNSKQLQRILD-NASVKPVTNQVE 586
S L+ D N + + + NQ +
Sbjct: 436 RDEGESPSLEDAEDANPTPESMDNQAD 462
>SB_24724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2021
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 250 IFPFNDTLLNLSLYSLTHFLLVSIDKCAVYVSISDVYGILNSLRNFSWFRL 98
+ P L ++L+ LT+ L S + VS + I+ L FSW+RL
Sbjct: 731 LLPQPHDFLAITLFQLTYQLAGSTENQTEIVSPNATEIIIKDLERFSWYRL 781
>SB_34108| Best HMM Match : DUF714 (HMM E-Value=0.0053)
Length = 455
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 588 HSTWLVTGFTEALSSILWSCFEL 520
++TW TGF ALS LWS +L
Sbjct: 75 NATWSYTGFFTALSQALWSVAKL 97
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 89 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 172
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_58186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 463 LPRVHVIHIRELDLTVRIRWEDRI 392
+ +V H R L +RIRW+DRI
Sbjct: 532 IKKVEQFHTRSLRAIMRIRWQDRI 555
>SB_32866| Best HMM Match : Occludin_ELL (HMM E-Value=0.25)
Length = 1034
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 164 DCAFVYGNEKEVGEAIKTKIQEGVVKREDLFIT 262
DC F G+ KE K+ + E ++K DLF T
Sbjct: 317 DCKFRLGSSKETSTPQKSDLLEALLKNLDLFRT 349
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 28.3 bits (60), Expect = 5.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 350 DLYLIHWPQAYKEDDAIFPTDAD 418
D+ +HWP +E D + TD+D
Sbjct: 1826 DMMTVHWPACLEERDGLSKTDSD 1848
>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1659
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 464 PSTCPRNPHPRTGSYRPHPLGRSHRLLCKPG 372
P ++P R Y PHPLG+ LC G
Sbjct: 81 PKALVQSPEARYMLYFPHPLGKCDSSLCGTG 111
>SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 869
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 20/50 (40%)
Frame = -2
Query: 463 LPRVHVIHIRELDLTVRIRWEDRIVFFVSLGPVDQXXXXXXXXXXXERYF 314
L ++ H R L +RIRW+DRI L D R++
Sbjct: 735 LKKLERFHTRSLRAIMRIRWQDRITNLEVLDRADTTSIEAKILQAQLRWY 784
>SB_53072| Best HMM Match : K_tetra (HMM E-Value=8.2e-31)
Length = 414
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +2
Query: 194 EVGEAIKTKIQEGVV-----KREDLFITSKLWNTFHRPDLVRGALEVSL 325
E+GE I +G++ K D + K+WN F PD A ++L
Sbjct: 87 ELGEDALNSISQGMLPNTIRKEPDRVVMRKIWNLFEHPDTSMLARAIAL 135
>SB_51284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 272 WNTFHRPDLVRGALEVSLRNLNIDYLDLYLIHWPQAYK-EDDA--IFPTDADGKIQFSDV 442
W +R L N+ I+ L++ L + P +K DD+ + P A+G+ + V
Sbjct: 477 WKCVNRGTTQGSVSSPYLFNIFINDLEINLCNQPALFKYADDSNIVIPVWANGECRTDLV 536
Query: 443 DYVDTWKALEPLVCH 487
D TW +VC+
Sbjct: 537 DLFLTWTKDNGMVCN 551
>SB_35264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = -1
Query: 449 RNPHPRTGSYRPHPLGRSHRLLCKPGASGSDR-DRDSQY*GS*AILRGRHGRGQ 291
R+ + R SYR HR LC P G R D D + + R H + Q
Sbjct: 140 RSQYQRLHSYRGSRTSSRHRELCLPSKGGESRPDHDKSHPTNGGESRPDHDKSQ 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,040,995
Number of Sequences: 59808
Number of extensions: 400510
Number of successful extensions: 1324
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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