Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G11
(644 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 1.9
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.3
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 23 3.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 4.4
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 4.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.7
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 7.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 7.7
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 533 LQRILDNASVKPVTNQVECHPYLNQKRLKQ 622
+QRI+ KP+ Q++ P+ Q++ +Q
Sbjct: 1082 MQRIIAQIGGKPIAVQIQQSPHQQQQQQQQ 1111
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = -2
Query: 583 DLVSDWFHRGVVEYPLELLRVEVRDTEAADEPVAH 479
++++ W +RGV + ++ + D DEP A+
Sbjct: 207 NVLTFWMNRGVDGFRIDAINHMFEDARLLDEPSAN 241
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
PG+++ +D HI C F EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAEIKEK 378
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
PG+++ +D HI C F EK
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEK 89
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 193 LLVSIDKCA-VYVSISDVYGILNSLRNFSWFRLPSAYSNYGNFCTV 59
L+ S+D + + SDV+ +S SW RL S + + + C V
Sbjct: 59 LVASLDGALKLRIRCSDVHHFESSFNAQSWQRLTSLHELHVHGCKV 104
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.4
Identities = 16/74 (21%), Positives = 27/74 (36%)
Frame = +1
Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531
+L+D + G+ + + P G L CGL+ + + + L L
Sbjct: 209 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 268
Query: 532 APEDTRQRLCETSH 573
+ D R R E H
Sbjct: 269 SFRDFRDRTTEQQH 282
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
PG+++ +D HI C F EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFADIKEK 378
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 4.4
Identities = 16/74 (21%), Positives = 27/74 (36%)
Frame = +1
Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531
+L+D + G+ + + P G L CGL+ + + + L L
Sbjct: 204 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 263
Query: 532 APEDTRQRLCETSH 573
+ D R R E H
Sbjct: 264 SFRDFRDRTTEQQH 277
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 5.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 412 IRWEDRIVFFVSLGP 368
++W ++V+F SL P
Sbjct: 228 VKWTGKVVYFTSLFP 242
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 5.8
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 412 IRWEDRIVFFVSLGP 368
++W ++V+F SL P
Sbjct: 281 VKWTGKVVYFTSLFP 295
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.8
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -3
Query: 252 KSSLLTTPS*ILVFIASPTSFSFP*TNAQSMCLYPMSMASLTACVTSP 109
KSS +T S I S S P N + P+SM++L + V SP
Sbjct: 357 KSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSP 404
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 250 IFPFNDTLLNLSLYSLTH 197
IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 250 IFPFNDTLLNLSLYSLTH 197
IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 250 IFPFNDTLLNLSLYSLTH 197
IFPF+D L + ++ S+++
Sbjct: 243 IFPFDDPLCSFAIESISY 260
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 7.7
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = -2
Query: 250 IFPFNDTLLNLSLYSLTH 197
IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 556 GVVEYPLELLRVEVRDTE 503
G V Y LELL V+ D+E
Sbjct: 3 GFVNYALELLVVKTFDSE 20
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 556 GVVEYPLELLRVEVRDTE 503
G V Y LELL V+ D+E
Sbjct: 3 GFVNYALELLVVKTFDSE 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,565
Number of Sequences: 438
Number of extensions: 3753
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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