BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0005_G11 (644 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.9 AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 1.9 X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.3 EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 23 3.3 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.4 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.4 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 22 4.4 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 4.4 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.8 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.8 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.8 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.7 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.7 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.7 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.7 AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 7.7 AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 7.7 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 23.4 bits (48), Expect = 1.9 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +2 Query: 533 LQRILDNASVKPVTNQVECHPYLNQKRLKQ 622 +QRI+ KP+ Q++ P+ Q++ +Q Sbjct: 1082 MQRIIAQIGGKPIAVQIQQSPHQQQQQQQQ 1111 >AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase protein. Length = 580 Score = 23.4 bits (48), Expect = 1.9 Identities = 9/35 (25%), Positives = 19/35 (54%) Frame = -2 Query: 583 DLVSDWFHRGVVEYPLELLRVEVRDTEAADEPVAH 479 ++++ W +RGV + ++ + D DEP A+ Sbjct: 207 NVLTFWMNRGVDGFRIDAINHMFEDARLLDEPSAN 241 >X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha protein. Length = 461 Score = 22.6 bits (46), Expect = 3.3 Identities = 9/29 (31%), Positives = 13/29 (44%) Frame = +2 Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193 PG+++ +D HI C F EK Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAEIKEK 378 >EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-alpha protein. Length = 119 Score = 22.6 bits (46), Expect = 3.3 Identities = 9/29 (31%), Positives = 13/29 (44%) Frame = +2 Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193 PG+++ +D HI C F EK Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEK 89 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 22.2 bits (45), Expect = 4.4 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 193 LLVSIDKCA-VYVSISDVYGILNSLRNFSWFRLPSAYSNYGNFCTV 59 L+ S+D + + SDV+ +S SW RL S + + + C V Sbjct: 59 LVASLDGALKLRIRCSDVHHFESSFNAQSWQRLTSLHELHVHGCKV 104 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 22.2 bits (45), Expect = 4.4 Identities = 16/74 (21%), Positives = 27/74 (36%) Frame = +1 Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531 +L+D + G+ + + P G L CGL+ + + + L L Sbjct: 209 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 268 Query: 532 APEDTRQRLCETSH 573 + D R R E H Sbjct: 269 SFRDFRDRTTEQQH 282 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 22.2 bits (45), Expect = 4.4 Identities = 9/29 (31%), Positives = 13/29 (44%) Frame = +2 Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193 PG+++ +D HI C F EK Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFADIKEK 378 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 22.2 bits (45), Expect = 4.4 Identities = 16/74 (21%), Positives = 27/74 (36%) Frame = +1 Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531 +L+D + G+ + + P G L CGL+ + + + L L Sbjct: 204 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 263 Query: 532 APEDTRQRLCETSH 573 + D R R E H Sbjct: 264 SFRDFRDRTTEQQH 277 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 21.8 bits (44), Expect = 5.8 Identities = 6/15 (40%), Positives = 11/15 (73%) Frame = -2 Query: 412 IRWEDRIVFFVSLGP 368 ++W ++V+F SL P Sbjct: 228 VKWTGKVVYFTSLFP 242 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 21.8 bits (44), Expect = 5.8 Identities = 6/15 (40%), Positives = 11/15 (73%) Frame = -2 Query: 412 IRWEDRIVFFVSLGP 368 ++W ++V+F SL P Sbjct: 281 VKWTGKVVYFTSLFP 295 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.8 bits (44), Expect = 5.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -3 Query: 252 KSSLLTTPS*ILVFIASPTSFSFP*TNAQSMCLYPMSMASLTACVTSP 109 KSS +T S I S S P N + P+SM++L + V SP Sbjct: 357 KSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSP 404 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 21.4 bits (43), Expect = 7.7 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = -2 Query: 250 IFPFNDTLLNLSLYSLTH 197 IFPF+D L + ++ S+++ Sbjct: 192 IFPFDDPLCSFAIESISY 209 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 21.4 bits (43), Expect = 7.7 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = -2 Query: 250 IFPFNDTLLNLSLYSLTH 197 IFPF+D L + ++ S+++ Sbjct: 192 IFPFDDPLCSFAIESISY 209 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 21.4 bits (43), Expect = 7.7 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = -2 Query: 250 IFPFNDTLLNLSLYSLTH 197 IFPF+D L + ++ S+++ Sbjct: 243 IFPFDDPLCSFAIESISY 260 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 21.4 bits (43), Expect = 7.7 Identities = 7/18 (38%), Positives = 14/18 (77%) Frame = -2 Query: 250 IFPFNDTLLNLSLYSLTH 197 IFPF+D L + ++ S+++ Sbjct: 192 IFPFDDPLCSFAIESISY 209 >AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 7.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 556 GVVEYPLELLRVEVRDTE 503 G V Y LELL V+ D+E Sbjct: 3 GFVNYALELLVVKTFDSE 20 >AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 21.4 bits (43), Expect = 7.7 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -2 Query: 556 GVVEYPLELLRVEVRDTE 503 G V Y LELL V+ D+E Sbjct: 3 GFVNYALELLVVKTFDSE 20 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 168,565 Number of Sequences: 438 Number of extensions: 3753 Number of successful extensions: 23 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19438227 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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