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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G11
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.9  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   3.3  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    23   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   4.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   4.4  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 533  LQRILDNASVKPVTNQVECHPYLNQKRLKQ 622
            +QRI+     KP+  Q++  P+  Q++ +Q
Sbjct: 1082 MQRIIAQIGGKPIAVQIQQSPHQQQQQQQQ 1111


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -2

Query: 583 DLVSDWFHRGVVEYPLELLRVEVRDTEAADEPVAH 479
           ++++ W +RGV  + ++ +     D    DEP A+
Sbjct: 207 NVLTFWMNRGVDGFRIDAINHMFEDARLLDEPSAN 241


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
           PG+++      +D    HI C F    EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFAEIKEK 378


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
           PG+++      +D    HI C F    EK
Sbjct: 61  PGQISNGYTPVLDCHTAHIACKFAEIKEK 89


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -2

Query: 193 LLVSIDKCA-VYVSISDVYGILNSLRNFSWFRLPSAYSNYGNFCTV 59
           L+ S+D    + +  SDV+   +S    SW RL S +  + + C V
Sbjct: 59  LVASLDGALKLRIRCSDVHHFESSFNAQSWQRLTSLHELHVHGCKV 104


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/74 (21%), Positives = 27/74 (36%)
 Frame = +1

Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531
           +L+D +  G+   + + P G       L CGL+ +        + +       L   L  
Sbjct: 209 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 268

Query: 532 APEDTRQRLCETSH 573
           +  D R R  E  H
Sbjct: 269 SFRDFRDRTTEQQH 282


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 107 PGEVTQAVKDAIDIGYRHIDCAFVYGNEK 193
           PG+++      +D    HI C F    EK
Sbjct: 350 PGQISNGYTPVLDCHTAHIACKFADIKEK 378


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 16/74 (21%), Positives = 27/74 (36%)
 Frame = +1

Query: 352 SLSDPLAPGLQRRRCDLPNGCGR*DPVLGCGLRGHVEGSRASRVPRARPQPRCLELQLEA 531
           +L+D +  G+   + + P G       L CGL+ +        + +       L   L  
Sbjct: 204 TLADQIKNGIVSPQEERPKGINGRRASLFCGLQKYTRSFAHQSINKEARSNLYLPFHLTL 263

Query: 532 APEDTRQRLCETSH 573
           +  D R R  E  H
Sbjct: 264 SFRDFRDRTTEQQH 277


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 412 IRWEDRIVFFVSLGP 368
           ++W  ++V+F SL P
Sbjct: 228 VKWTGKVVYFTSLFP 242


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 412 IRWEDRIVFFVSLGP 368
           ++W  ++V+F SL P
Sbjct: 281 VKWTGKVVYFTSLFP 295


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -3

Query: 252 KSSLLTTPS*ILVFIASPTSFSFP*TNAQSMCLYPMSMASLTACVTSP 109
           KSS  +T S I     S    S P  N     + P+SM++L + V SP
Sbjct: 357 KSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSP 404


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 250 IFPFNDTLLNLSLYSLTH 197
           IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 250 IFPFNDTLLNLSLYSLTH 197
           IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 250 IFPFNDTLLNLSLYSLTH 197
           IFPF+D L + ++ S+++
Sbjct: 243 IFPFDDPLCSFAIESISY 260


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 250 IFPFNDTLLNLSLYSLTH 197
           IFPF+D L + ++ S+++
Sbjct: 192 IFPFDDPLCSFAIESISY 209


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 556 GVVEYPLELLRVEVRDTE 503
           G V Y LELL V+  D+E
Sbjct: 3   GFVNYALELLVVKTFDSE 20


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 556 GVVEYPLELLRVEVRDTE 503
           G V Y LELL V+  D+E
Sbjct: 3   GFVNYALELLVVKTFDSE 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,565
Number of Sequences: 438
Number of extensions: 3753
Number of successful extensions: 23
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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