Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G09
         (668 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79110.2 68414.m09225 expressed protein                             30   1.6  
At1g79110.1 68414.m09224 expressed protein                             30   1.6  
At1g41650.1 68414.m04798 hypothetical protein                          29   2.8  
At2g45900.1 68415.m05708 expressed protein                             28   6.5  
At2g33600.1 68415.m04118 cinnamoyl-CoA reductase family similar ...    28   6.5  
At1g32220.1 68414.m03963 expressed protein                             28   6.5  
At5g64260.1 68418.m08073 phosphate-responsive protein, putative ...    27   8.5  
At5g07070.1 68418.m00800 CBL-interacting protein kinase 2 (CIPK2...    27   8.5  
At4g05636.1 68417.m00878 hypothetical protein                          27   8.5  
At3g21250.1 68416.m02685 ABC transporter family protein similar ...    27   8.5  
At1g17840.1 68414.m02208 ABC transporter family protein similar ...    27   8.5  

>At1g79110.2 68414.m09225 expressed protein
          Length = 355

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -3

Query: 603 QGK*STRRQVFCS*CGCDCRTPDRLPPHQVCLLTQVLGSVSACP-TTSDANNSIH 442
           Q K   RR+  C  CG +      LP   +CL      SV  CP  TS  N S+H
Sbjct: 296 QDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVH 350


>At1g79110.1 68414.m09224 expressed protein
          Length = 358

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -3

Query: 603 QGK*STRRQVFCS*CGCDCRTPDRLPPHQVCLLTQVLGSVSACP-TTSDANNSIH 442
           Q K   RR+  C  CG +      LP   +CL      SV  CP  TS  N S+H
Sbjct: 299 QDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVH 353


>At1g41650.1 68414.m04798 hypothetical protein
          Length = 178

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 544 NSRPIAATSSLPAYSGPWQRFRLPNHQRRK*QHSLS 437
           N+RPI    +LP+YS PW      +HQ     HS++
Sbjct: 82  NTRPI----TLPSYSTPWSSIITHHHQHHSTGHSIT 113


>At2g45900.1 68415.m05708 expressed protein
          Length = 720

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 322 IDLNPNESADFNVAVPKDASWVQQEQHVVNELSNAL 429
           +D N +E  +F + VP+D    ++EQ V++ LS A+
Sbjct: 407 LDSNNHEETEF-MPVPEDTRMEEEEQTVMDSLSEAI 441


>At2g33600.1 68415.m04118 cinnamoyl-CoA reductase family similar to
           cinnamoyl-CoA reductase from Pinus taeda [GI:17978649],
           Eucalyptus gunnii [GI:2058311]
          Length = 321

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 223 IMTSGRIIIYGGRGALGSACVNHFKSSNWWV 315
           ++  G++ + G  G LGS  VNH  S +++V
Sbjct: 3   VVQKGKVCVTGAGGFLGSWVVNHLLSRDYFV 33


>At1g32220.1 68414.m03963 expressed protein
          Length = 296

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
 Frame = +1

Query: 214 IDVI--MTSGRIIIYGGRGALGSACVNHFKSSNWWVANIDLNPNESADFNVAVPKDASWV 387
           ID++  + S R+++ GG G +GSA      S+   +  + ++ +   +F  +     +WV
Sbjct: 54  IDIVADVKSERVVVLGGNGFVGSAICKAAISNG--IEVVSVSRSGRPNFEDSWLDQVTWV 111

Query: 388 QQEQHVVNELSNALQGQKVNAVICVAGGWAGGNAAKDLSKQADL 519
             +   +N     L G    AV+   GG+      K ++ +A++
Sbjct: 112 TGDVFYLN-WDEVLLG--ATAVVSTIGGFGNEEQMKRINGEANV 152


>At5g64260.1 68418.m08073 phosphate-responsive protein, putative
           similar to phi-1 (phosphate-induced gene) [Nicotiana
           tabacum] GI:3759184; contains Pfam profile PF04674:
           Phosphate-induced protein 1 conserved region
          Length = 305

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 151 GYFSGTQTLPLLSVSSCP 204
           GY+ G  T PL +VS+CP
Sbjct: 236 GYYQGPPTAPLEAVSACP 253


>At5g07070.1 68418.m00800 CBL-interacting protein kinase 2 (CIPK2)
           identical to CBL-interacting protein kinase 2
           [Arabidopsis thaliana] gi|9280636|gb|AAF86506
          Length = 456

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
 Frame = +1

Query: 292 FKSSNWWVANID------LNPNESADFNVAVPKDASWVQQEQHVVNELSNALQGQKV-NA 450
           FK  +W+   +       L+PN      +A  K++SW ++  H+  +    ++ Q+V  A
Sbjct: 229 FKCPSWFAPEVKRLLCKMLDPNHETRITIAKIKESSWFRKGLHLKQKKMEKMEKQQVREA 288

Query: 451 VICVAGGWAGGN 486
              +  G +G N
Sbjct: 289 TNPMEAGGSGQN 300


>At4g05636.1 68417.m00878 hypothetical protein
          Length = 193

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 544 NSRPIAATSSLPAYSGPWQRFRLPNHQRRK*QHSLS 437
           N+RP     +LP+YS PW      +HQ     HS++
Sbjct: 97  NTRPF----TLPSYSTPWSSIITHHHQHHSTGHSIT 128


>At3g21250.1 68416.m02685 ABC transporter family protein similar to
            MRP-like ABC transporter GB:AAC49791 from [Arabidopsis
            thaliana]
          Length = 1294

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 435  TLQSVT*FVDYMLLLLYPRGIFRHGNVEIS 346
            TLQ+VT F   +LL+L P+G    G V +S
Sbjct: 956  TLQNVTLFTCALLLILIPKGYIAPGLVGLS 985


>At1g17840.1 68414.m02208 ABC transporter family protein similar to
           ABC transporter GI:10280532 from [Homo sapiens]
          Length = 703

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 37  YRFYVICLLVGSGDIDS*YLAYASVILSFT--LVIDKKVKGYF 159
           Y F+V+CL      ++S  +A AS++ +F   ++I   ++G F
Sbjct: 512 YLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIF 554


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,003,838
Number of Sequences: 28952
Number of extensions: 283890
Number of successful extensions: 735
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)