Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G08
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    45   7e-07
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   7.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 44.8 bits (101), Expect = 7e-07
 Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +2

Query: 140 LCAGGKPGEDACRGDSGGPLMYEVGNT--FVMVGSVSYGPKYCGTRNIPGVYTNVYEYIP 313
           +CA  K G+DAC+ DSGGP++++   T   V +G +S+G + CG    P   T V  YI 
Sbjct: 335 MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE-CG--KYPNGNTKVGSYID 390

Query: 314 WIRS 325
           WI S
Sbjct: 391 WIVS 394


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 213 PTSYMRGPPESPLHASSPGLPP 148
           P +  RG P +P     PG PP
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPP 52



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 192 PPESPLHASSPGLPPAHSCS-LVITSAS 112
           P + P     PG PP+ + S ++I+ AS
Sbjct: 42  PSQGPPPGGPPGAPPSQNPSQMMISPAS 69


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 393 SLIAATKLKSDLKKKNVVSHVVEVKP*KNDTK 488
           S+ A TKL      K+ V  V   KP K  TK
Sbjct: 225 SIRAVTKLPDTSMAKSFVRKVHATKPPKPQTK 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,092
Number of Sequences: 438
Number of extensions: 3686
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)