Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G03
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 680 LPTPSACPVPXLESLTRGVPQRISYR 603
           +PTPS    P   ++ +  PQ  SYR
Sbjct: 224 IPTPSTSASPPTVNIKKESPQMQSYR 249


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 10  CAVKIKTFIYVFVRLYCTYT 69
           C   +  F YV + LYC YT
Sbjct: 320 CLNILSIFTYVPMILYCVYT 339


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 10  CAVKIKTFIYVFVRLYCTYT 69
           C   +  F YV + LYC YT
Sbjct: 45  CLNILSIFTYVPMILYCVYT 64


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 124 FCASVCKGCTFDGSRYKFNS 183
           + AS+ K   FDG  Y FN+
Sbjct: 58  YFASLEKNPLFDGQLYSFNT 77


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 151 CSLYTHWRRRRLPTQRVP 98
           CS Y+ W R  L   +VP
Sbjct: 288 CSFYSDWTRVWLDDAQVP 305


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 492  SGSYPMKLGRRRSI 533
            SGS P ++GRR++I
Sbjct: 1405 SGSGPDRIGRRKTI 1418


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 492  SGSYPMKLGRRRSI 533
            SGS P ++GRR++I
Sbjct: 1405 SGSGPDRIGRRKTI 1418


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 492  SGSYPMKLGRRRSI 533
            SGS P ++GRR++I
Sbjct: 1405 SGSGPDRIGRRKTI 1418


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 492  SGSYPMKLGRRRSI 533
            SGS P ++GRR++I
Sbjct: 1405 SGSGPDRIGRRKTI 1418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,145
Number of Sequences: 336
Number of extensions: 3388
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)