Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_G03
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 41 0.001
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2) 29 4.7
SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9) 29 4.7
SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21) 28 6.2
SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3) 28 8.3
SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99) 28 8.3
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +2
Query: 368 SHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 526
+ + G + N L Y YL A +F+ IN GF+K F+K S E WE A
Sbjct: 32 NQLEGPINKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 410 LKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 526
++R YE A +F+ IN GF+K F+K S E WE A
Sbjct: 24 MRRDYE----AFHFDRDDINLPGFNKFFKKASKEEWEHA 58
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 401 NLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKA 526
NL L SY Y A YF+ ++ GF K F+K + E E A
Sbjct: 21 NLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHA 62
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 213 FIVPRRLCIDGIKFITRTVESAAFTHTGAEGDFQHKEYLLD-RDKNLPYCIGTIQTDKYV 37
FI PR D K + + HTG+ DF + E L+ D ++ C+ I D
Sbjct: 1675 FIAPRNRTRDTAKSVKQPKFGIPQNHTGSHEDFSNYEGLISLYDDDIAQCVELIDPDNVD 1734
Query: 36 N 34
N
Sbjct: 1735 N 1735
>SB_29831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 566 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 682
+DF EP +++ + LD LA +LDT+K AE
Sbjct: 84 LDFKNNESKGEEPKEQHSIHESLLDDLAKSLDTKKRTAE 122
>SB_37731| Best HMM Match : TPD52 (HMM E-Value=1.2)
Length = 499
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 566 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 682
+DF+ EP +++ + LD+LA +LDT++ AE
Sbjct: 84 LDFNNNESKAEEPKEQHFIHESLLDNLAKSLDTKERTAE 122
>SB_2443| Best HMM Match : GrpE (HMM E-Value=1.9)
Length = 171
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 566 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 682
+DF+ EP +++ + LD LA +LDT+K AE
Sbjct: 84 LDFNNNESKAAEPEEQHSIHELLLDDLAKSLDTKKRTAE 122
>SB_19521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Frame = +2
Query: 560 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAXALDT 664
I ++FS+ +IYDPE K+ VV +H E+D + A +T
Sbjct: 196 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDMCLADNT 236
>SB_1712| Best HMM Match : Peptidase_C14 (HMM E-Value=1.6e-21)
Length = 594
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Frame = +2
Query: 560 INMDFSR----RSIYDPEPGKKYVVELH--ELDSLAXALDT 664
I ++FS+ +IYDPE K+ VV +H E+D + A +T
Sbjct: 240 IKLEFSKAIHDENIYDPEDRKQQVVHIHTTEIDDICLADNT 280
>SB_197| Best HMM Match : LISCH7 (HMM E-Value=1.3)
Length = 120
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 316 CRCRHTFSCHSFVTTVTCVNARQSQETSYCECDFLHC 206
CRC T C F T C AR + C C HC
Sbjct: 35 CRCFAT-RCRCFATRCHCFAARCRCFAARCRCFAAHC 70
>SB_43303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 566 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 682
+DF+ EP +++ + LD LA +LDT++ AE
Sbjct: 54 LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 92
>SB_7268| Best HMM Match : DUF472 (HMM E-Value=0.99)
Length = 554
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 566 MDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAE 682
+DF+ EP +++ + LD LA +LDT++ AE
Sbjct: 84 LDFNNNESKAEEPKEQHSIHESLLDDLAKSLDTKERTAE 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,788,725
Number of Sequences: 59808
Number of extensions: 428800
Number of successful extensions: 1157
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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