Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_G03
         (692 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    31   0.96 
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g...    29   2.9  
At1g29740.1 68414.m03636 leucine-rich repeat family protein / pr...    29   3.9  
At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA...    28   5.1  
At5g17220.1 68418.m02018 glutathione S-transferase, putative           28   5.1  
At5g44630.1 68418.m05468 terpene synthase/cyclase family protein       28   6.8  
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy...    28   6.8  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 29/111 (26%), Positives = 50/111 (45%)
 Frame = +2

Query: 353 EYNDYSHVAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDEAWEKAID 532
           +Y+D    A  +    N+    SY Y    +YF+   I   G +K F++ S E  E A  
Sbjct: 92  KYSDECEAA--INEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEK 149

Query: 533 LIKHVTMRGINMDFSRRSIYDPEPGKKYVVELHELDSLAXALDTQKELAER 685
           L+++   RG  +    +SI  P    ++V +   L  +  AL  +K + E+
Sbjct: 150 LMEYQNKRGGRVKL--QSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEK 198


>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-glucan
            synthase 1 nearly identical to callose synthase 1
            catalytic subunit [Arabidopsis thaliana] GI:13649388
          Length = 1922

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 449  FNNYKINRAGFSKMFRKLSDEAWEKAIDLIKHVTMRGINMD 571
            +N +  NR G      K  +  WEK ++ ++H  +RGI ++
Sbjct: 1692 WNKWIYNRGGIGVPPEKSWESWWEKELEHLRHSGVRGITLE 1732


>At1g29740.1 68414.m03636 leucine-rich repeat family protein /
           protein kinase family protein contains Pfam domains
           PF00560: Leucine Rich Repeat and PF00069: Protein kinase
           domain
          Length = 1049

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +1

Query: 307 YNDNFVSGQV*RAIRRIQ*LQPRRWRTSGLRQPLPQAVIRI 429
           ++DN ++G +   I  +  LQ      SGL+ P+P ++ R+
Sbjct: 225 FSDNRLNGSIPEFIGNLSKLQRLELYASGLKDPIPYSIFRL 265


>At5g58270.1 68418.m07295 mitochondrial half-ABC transporter (STA1)
           identical to half-molecule ABC transporter ATM3
           GI:9964121 from [Arabidopsis thaliana]; almost identical
           to mitochondrial half-ABC transporter STA1 GI:9187883
           from [Arabidopsis thaliana]; identical to cDNA
           mitochondrial half-ABC transporter (STA1 gene)GI:9187882
          Length = 728

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 225 NVIFFIVPRRLCIDGIKFITRTVESAAFTHTGAEG 121
           NV F  +P R  +DGI F+    +S A   T   G
Sbjct: 483 NVHFSYLPERKILDGISFVVPAGKSVAIVGTSGSG 517


>At5g17220.1 68418.m02018 glutathione S-transferase, putative
          Length = 214

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 374 VAGELQAYANLYLKRSYEYLLSASYFNNYKINRAGFSKMFRKLSDE-AWEKAIDLIKH 544
           +AGE    A+L    +  YL+S +  N     R  F++ + ++SD  +W+K + L  H
Sbjct: 157 LAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWKKLMVLAGH 214


>At5g44630.1 68418.m05468 terpene synthase/cyclase family protein 
          Length = 557

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +2

Query: 443 SYFNNYKINRAGFSKMFRKLSD-----EAWEKAIDLIKHVTMRGINMDFSRRSIYDPEPG 607
           SY N  K+  + +   F K S      +  E+ I+++K      I +  S     D +  
Sbjct: 11  SYTNFTKLPSSQWGDQFLKFSIADSDFDVLEREIEVLKPKVRENIFVSSST----DKDAM 66

Query: 608 KKYVVELHELDSLAXALDTQKELAE 682
           KK ++ +H LDSL  +   +KE+ E
Sbjct: 67  KKTILSIHFLDSLGLSYHFEKEIEE 91


>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
           cytochrome P450 SP:O48927 from [Glycine max]
          Length = 535

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -3

Query: 633 SWSSTTYFLPGSGS*MLRLEKSMLIPLIVTCLIKSIAFSQASSDNFLNILL 481
           +W+    +L G     +R   S L+P +   L + I   +A++ NFL++LL
Sbjct: 259 NWTDHLPWLAGLDFQQIRFRCSQLVPKVNLLLSRIIHEQRAATGNFLDMLL 309


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,075,589
Number of Sequences: 28952
Number of extensions: 281264
Number of successful extensions: 696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)